Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF47
Confidence60.55%DateThu Jan 5 11:31:02 GMT 2012
Rank400Aligned Residues53
% Identity9%Templated1j1va_
SCOP infoDNA/RNA-binding 3-helical bundle TrpR-like Chromosomal replication initiation factor DnaA C-terminal domain IV
Resolution2.10

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40. ........50.....
Predicted Secondary structure 

















.
Query SS confidence 






































.













Query Sequence  DVLGPEKRRRRTTQEKIAIVQQSFEPGMTVSLVARQHGV. AASQLFLWRKQYQE
Query Conservation        


 

 


  

      
 

 



  

.  
 
  
 
   
Alig confidence 






































.













Template Conservation   
 
  
   
  

 




 
     

  

  

 





  
  

  
Template Sequence  DLLSKRRSRSVARPRQXAXALAKELTNHSLPEIGDAFGGRDHTTVLHACRKIEQ
Template Known Secondary structure  S



S


TTS

Template Predicted Secondary structure 











Template SS confidence 





















































   393......400.........410.........420.........430.........440......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions