Job Description P0CF47 Confidence 69.94% Date Thu Jan 5 11:31:02 GMT 2012 Rank 318 Aligned Residues 44 % Identity 14% Template c3l1pA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:pou domain, class 5, transcription factor 1; PDBTitle: pou protein:dna complex Resolution 2.80 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.
Query SS confidence																															.	.	.	.
Query Sequence		G	P	E	K	R	R	R	R	T	T	Q	E	K	I	A	I	V	Q	Q	S	F	E	P	G	M	T	V	S	L	.	.	.	.	V	A	R	Q	H	G	V	A	A	S	Q	L	F	L	W
Query Conservation																															.	.	.	.
Alig confidence																															.	.	.	.
Template Conservation
Template Sequence		R	K	R	K	R	T	S	I	E	N	R	V	R	W	S	L	E	T	M	F	L	K	S	P	K	P	S	L	Q	Q	I	T	H	I	A	N	Q	L	G	L	E	K	D	V	V	R	V	W
Template Known Secondary structure		S																	T	T	T	T	T		S														T	T
Template Predicted Secondary structure
Template SS confidence
		93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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