Job Description P0CF47 Confidence 86.48% Date Thu Jan 5 11:31:02 GMT 2012 Rank 114 Aligned Residues 74 % Identity 14% Template c2w7nA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:trfb transcriptional repressor protein; PDBTitle: crystal structure of kora bound to operator dna: insight2 into repressor cooperation in rp4 gene regulation Resolution 1.85 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		Q	E	K	I	A	I	V	Q	Q	S	F	E	P	G	M	T	V	S	L	V	A	R	Q	H	G	V	A	A	S	Q	L	F	L	W	R	K	Q	Y	Q	E	G	S	L	T	.	A	V	A	A	G	E	Q	V	V	P	A	S	E	L	A	A	A	M	K	Q	I	K	E	L	Q	R	L	L	G	K
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		Q	Q	T	I	E	I	A	R	G	V	L	V	D	G	K	P	Q	A	T	F	A	T	S	L	G	L	T	R	G	A	V	S	Q	A	V	H	R	V	W	A	A	F	E	D	K	N	L	P	E	G	Y	A	R	V	T	A	V	L	P	E	H	Q	A	Y	I	V	R	K	W	E	A	D	A	K	K
Template Known Secondary structure													T	T												T																				T				T	T
Template Predicted Secondary structure
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions