 |
Job Description | P0CF47 | Confidence | 87.45% | Date | Thu Jan 5 11:31:02 GMT 2012 |
Rank | 97 | Aligned Residues | 45 |
% Identity | 13% | Template | c2da5A_ |
PDB info |
PDB header:dna binding protein | Chain: A: PDB Molecule:zinc fingers and homeoboxes protein 3; |
PDBTitle: solution structure of the second homeobox domain of zinc2 fingers and homeoboxes protein 3 (triple homeobox 13 protein)
|
Resolution | UNK |
|
  |   |
5 | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | G | P | E | K | R | R | R | R | T | T | Q | E | K | I | A | I | V | Q | Q | S | F | E | . |
. |
. |
. |
P | G | M | T | V | S | L | V | A | R | Q | H | G | V | A | A | S | Q | L | F | L | W |
Query Conservation |   |
  |   |   |   |
|
|
|   |
|
|   |
|
|
|   |   |
|
|   |   |   |   |   | . | . | . | . |   |
|   |
|
|   |
|
|
|
|   |   |
|
|   |   |
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |   |
|
Template Sequence |   |
S | G | P | T | K | Y | K | E | R | A | P | E | Q | L | R | A | L | E | S | S | F | A | Q | N | P | L | P | L | D | E | E | L | D | R | L | R | S | E | T | K | M | T | R | R | E | I | D | S | W |
Template Known Secondary structure |   |
| S | S |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
6 | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|