Return to main results Retrieve Phyre Job Id

Job DescriptionP0CF47
Confidence70.95%DateThu Jan 5 11:31:02 GMT 2012
Rank306Aligned Residues44
% Identity14%Templatec2da3A_
PDB info PDB header:transcriptionChain: A: PDB Molecule:alpha-fetoprotein enhancer binding protein; PDBTitle: solution structure of the third homeobox domain of at-2 binding transcription factor 1 (atbf1)
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20....... ..30.........40.........
Predicted Secondary structure 








....






Query SS confidence 





















. . . .





















Query Sequence  GPEKRRRRTTQEKIAIVQQSFE. . . . PGMTVSLVARQHGVAASQLFLW
Query Conservation     


 

 


  

     .... 
 

 



  

  
 
  
Alig confidence 





















....





















Template Conservation   

 

  
  
   

  
     
       

    
    
  
Template Sequence  DKRLRTTITPEQLEILYQKYLLDSNPTRKMLDHIAHEVGLKKRVVQVW
Template Known Secondary structure 
TT

SS

TTT
SS

TS
Template Predicted Secondary structure 
















Template SS confidence 















































   17..20.........30.........40.........50.........60....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions