Job Description P22256 Confidence 99.88% Date Thu Jan 5 11:38:48 GMT 2012 Rank 181 Aligned Residues 341 % Identity 11% Template d1yaaa_ SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like Resolution 2.05

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.								.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																			.																																						.	.	.	.	.	.	.
Query SS confidence																			.																																						.	.	.	.	.	.	.
Query Sequence		L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	.	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	.	.	.	.	.	.	.	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V
Query Conservation																			.																																						.	.	.	.	.	.	.
Alig confidence																			.																																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	D	L	G	I	G	A	Y	R	D	D	N	G	K	P	W	V	L	P	S	V	K	A	A	E	K	L	I	H	N	D	S	S	Y	N	H	E	Y	L	G	I	T	G	L	P	S	L	T	S	N	A	A	K	I	I	F	G	T	Q	S	D	A	L	Q	E	D	R	V	I	S	V	Q	S	L	S	G	T	G	A	L
Template Known Secondary structure					S	S				B		T	T	S		B															T		T	T								T	T																T	T						T	T
Template Predicted Secondary structure
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A
Query Conservation
Alig confidence																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Sequence		H	I	S	A	K	F	F	S	K	F	F	P	D	K	L	V	Y	L	S	K	P	T	W	A	N	H	.	M	A	I	F	E	N	Q	G	L	K	T	A	T	Y	P	Y	W	A	N	E	T	K	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	N	G	F	L	N	A	I	Q	K	A	.
Template Known Secondary structure													T	T								S			T	T		.						T	T	T											T	T	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												S	.
Template Predicted Secondary structure																												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.																	.	.	.	.	.	.	.	170	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.											.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	.	.	.	.	.	.	.	.	.	.	A	M	E	Q	M	G	V	A	P	D	L	T	T
Query Conservation																																																											.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.																																																								.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	P	E	G	S	I	F	V	L	H	S	C	A	H	N	P	T	G	L	D	P	T	S	E	Q	W	V	Q	I	V	D	A	I	A	S	K	N	H	I	A	L	F	D	T	A	Y	Q	G	F	A	T	G	D	L	D	K	D	A	Y	A	V	R	L	G	V	E	K	L	S	T	V	S	P	V	F	V	C	Q	S
Template Known Secondary structure		.	.		T	T								S	S		T	T	T																			T	T								S		T	T	T	S	S	S						T										T	T	T	T
Template Predicted Secondary structure		.	.
Template SS confidence
				181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		266	.	.	.	270	.		.	.	.	.	.	.	.	.	280	.												.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.									.	.	.	.	.	.	320	.	.	.	.	.
Predicted Secondary structure								.											.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query SS confidence								.											.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Query Sequence		F	A	K	S	I	A	.	G	G	F	P	L	A	G	V	T	G	.	.	.	.	.	.	.	.	.	.	.	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	.	.	.	.	.	.	.	.	V	F	E	Q	E	N	L	L	Q	K	A	N
Query Conservation								.											.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Alig confidence								.											.	.	.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	A	K	N	A	G	M	Y	G	E	R	V	G	C	F	H	L	A	L	T	K	Q	A	Q	N	K	T	I	K	P	A	V	T	S	Q	L	A	K	I	I	R	S	E	V	S	N	P	P	A	Y	G	A	K	I	V	A	K	L	L	E	T	P	E	L	T	E	Q	W	H	K	D	M	V	T	M	S	S	R	I	T
Template Known Secondary structure			T	T	T	S			G	G	G											S		T	T																		T	T	T	S	S															S
Template Predicted Secondary structure
Template SS confidence
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
		326	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.						.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.						.
Template Sequence		K	M	R	H	A	L	R	D	H	L	V	K	L	G	T	P	G	N	W	D	H	I	V	N	Q	C	G	M	F	S	F	T	G	L	T	P	.	.	.	.	.	.	.	.	.	.	.	.	Q	M	V	K	R	L	E	E	T	H	A	V	Y	L	V	A	S	G	.	.	.	.	.	.	R	A	S	I	A	.	G	L
Template Known Secondary structure															T		S	S			T							S	S									.	.	.	.	.	.	.	.	.	.	.	.																T	T	S	.	.	.	.	.	.				G	G	.	G
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.						.
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.													.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.							.	.	.	.	390		.	.
		406	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	Q	G	N	V	E	Y	V	A	K	A	I	D	E	V	V	R	F
Template Known Secondary structure			T	T	T
Template Predicted Secondary structure
Template SS confidence
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions