Job Description P22256 Confidence 99.93% Date Thu Jan 5 11:38:48 GMT 2012 Rank 120 Aligned Residues 341 % Identity 13% Template d1wyua1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.						.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.
Query SS confidence																																								.	.	.	.	.
Query Sequence		R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	.	.	.	.	.	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V
Query Conservation																																								.	.	.	.	.
Alig confidence																																								.	.	.	.	.																						.	.
Template Conservation																																																																		.	.
Template Sequence		Q	N	L	P	A	H	K	A	F	L	G	G	G	V	R	S	H	H	V	P	P	V	V	Q	A	L	A	A	R	G	E	F	L	T	A	Y	T	P	Y	Q	P	E	V	S	Q	G	V	L	Q	A	T	F	E	Y	Q	T	M	I	A	E	L	A	G	L	.	.	E	I	A	N	A	S	M	Y	D	G	A	T	A	L
Template Known Secondary structure		T	S				T	T					S	S															T	S								S			S	G	G	G																				T	S	.	.	S				S		B	S	S
Template Predicted Secondary structure																																																																		.	.
Template SS confidence
		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	E	G	V	L	L	A	L	R	E	T	G	R	M	G	V	L	V	S	Q	G	V	H	P	E	Y	R	A	V	L	R	A	Y	L	E	A	V	G	A	K	L	L	T	L	P	L	E	G	G	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	L	P	E
Template Known Secondary structure													T								T	T	S															T	T									B	T	T	B		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.																										.	190	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P
Query Conservation
Alig confidence															.									.	.	.	.
Template Conservation															.									.	.	.	.
Template Sequence		V	G	E	E	V	G	A	V	V	V	Q	N	P	.	N	F	L	G	A	L	E	D	.	.	.	.	L	G	P	F	A	E	A	A	H	G	A	G	A	L	F	V	A	V	A	D	P	L	S	L	G	V	L	K	P	P	G	A	Y	G	A	D	I	A	V	G	D	G	Q	S	L	G	L	P	M	G	F	G	G	P
Template Known Secondary structure				T	T								S	S	.		T	T	S	B				.	.	.	.											T	T									T	T	G	G	G	T	S							T		S							T	T	T	T				G	G	G		S
Template Predicted Secondary structure															.									.	.	.	.
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
			276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.																													.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.
Predicted Secondary structure		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D
Query Conservation		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	F	G	F	L	A	T	K	K	A	F	V	R	Q	L	P	G	R	L	V	S	E	T	V	D	V	E	G	R	R	G	F	I	L	T	L	Q	A	R	E	Q	Y	I	R	R	A	K	A	K	S	N	I	T	T	N	A	Q	L	T	A	L	M	G	A	M	Y	L	A	A	L	G	P	E	G	L	R	E	V	A	L
Template Known Secondary structure										G	G	G	G	G	G			S									T	T	S									G	G	G	S					G	G	G	S	S					S
Template Predicted Secondary structure
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.				.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																																																				.	.	.
Query SS confidence																																																																				.	.	.
Query Sequence		L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	.	.	.	Y	Y	N	V	L	R	I	L	V	P	L
Query Conservation																																																																				.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.																					.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.
Template Sequence		K	S	V	E	M	A	H	K	L	H	A	L	L	L	E	V	P	G	V	R	P	F	T	P	K	P	F	F	N	E	F	A	L	A	L	P	K	D	.	.	.	.	.	.	.	.	P	E	A	V	R	R	A	L	A	E	R	G	F	H	G	A	T	P	V	P	R	E	Y	G	E	N	L	A	L	F	A	A	T	E
Template Known Secondary structure															T	T	S	T	T					S		S	S	B		S							S	S		.	.	.	.	.	.	.	.											T	T									T	T	S		S	S								T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.
Template SS confidence
		348	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.									.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	H	E	E	E	D	L	L	A	L	R	E	A	L	K	E	V	L
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions