Job Description P22256 Confidence 100.00% Date Thu Jan 5 11:38:48 GMT 2012 Rank 27 Aligned Residues 385 % Identity 34% Template d1vefa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.35

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	E	L	M	Q	R	R	S	Q	A	I	P	R	G	V	G	Q	I	H	P	I	F	A	D	R	A	E	N	C	R	V	W	D	V	E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E
Query Conservation
Alig confidence																		.																																																											.
Template Conservation																		.																																																											.
Template Sequence		R	A	L	L	E	A	E	K	T	L	D	S	G	V	Y	N	.	K	H	D	L	L	I	V	R	G	Q	G	A	R	V	W	D	A	E	G	N	E	Y	I	D	C	V	G	G	Y	G	V	A	N	L	G	H	G	N	P	E	V	V	E	A	V	K	R	Q	A	E	T	L	M	A	M	P	Q	T	.	L	P	T	P
Template Known Secondary structure												S		S		S		.			S	S							B	T					T	T	S						S	S					T		T	T		B	T																				T	T	.	S
Template Predicted Secondary structure																		.																																																											.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.		.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.		.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		M	R	G	E	F	Y	R	T	L	T	A	I	L	P	P	E	.	L	N	R	V	F	P	V	N	S	G	T	E	A	N	E	A	A	L	K	F	A	R	A	H	T	G	R	K	K	F	V	A	A	M	R	G	F	S	G	R	T	M	G	S	L	S	V	T	W	E	P	K	Y	R	E	P	F	L	P	L	V	E	P
Template Known Secondary structure													T	S		T	T	.								S	S																	S								T	T					S	S						T								G	G	G		S		S	S
Template Predicted Secondary structure																		.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.		.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		V	E	F	I	P	Y	N	.	.	.	.	.	.	.	.	.	.	.	D	V	E	A	L	K	R	A	V	D	.	.	.	.	.	E	E	T	A	A	V	I	L	E	P	V	Q	G	E	G	G	V	R	P	A	T	P	E	F	L	R	A	A	R	E	I	T	Q	E	K	G	A	L	L	I	L	D	E	I	Q	T	G
Template Known Secondary structure							T	T	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	T	T								S			T	T	T	T	S																			T								T	T	T	T
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.												.	.	.	.	.	.	180	.	.	.						.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	G	R	T	G	K	R	F	A	F	E	H	F	G	I	V	P	D	I	L	T	L	A	K	A	L	G	G	G	V	P	L	G	V	A	V	M	R	E	E	V	A	R	S	M	P	K	G	G	H	G	T	T	F	G	G	N	P	L	A	M	A	A	G	V	A	A	I	R	Y	L	E	R	T	R	L	W	E	R	A
Template Known Secondary structure		T	T	T	T	S	S	S	S	T					T				S						G	G	G	G	T	T	S	S													T	S		T	T	S	S			S	S	T	T																			T	T
Template Predicted Secondary structure
Template SS confidence
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
		325	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T
Query Conservation
Alig confidence																.	.																									.	.	.	.	.	.	.	.	.																			.	.
Template Conservation																.	.																									.	.	.	.	.	.	.	.	.																			.	.
Template Sequence		A	E	L	G	P	W	F	M	E	K	L	R	A	I	.	.	P	S	P	K	I	R	E	V	R	G	M	G	L	M	V	G	L	E	L	K	E	K	A	A	.	.	.	.	.	.	.	.	.	P	Y	I	A	R	L	E	K	E	H	R	V	L	A	L	Q	A	G	.	.	P	T	V	I	R	F	L	P	P	L	V
Template Known Secondary structure														T	S	.	.			T	T								T	T							S	S		S		.	.	.	.	.	.	.	.	.																	S	S	.	.	T	T								T	T
Template Predicted Secondary structure																.	.																									.	.	.	.	.	.	.	.	.																			.	.
Template SS confidence
		311	.	.	.	.	.	.	.	.	320	.	.	.	.			.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.										.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.			.	.	.	370	.	.	.	.	.	.	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	E	K	E	D	L	E	R	V	V	E	A	V	R	A	V	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		378	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions