 |
Job Description | P22256 | Confidence | 51.16% | Date | Thu Jan 5 11:38:48 GMT 2012 |
Rank | 306 | Aligned Residues | 43 |
% Identity | 26% | Template | d1ud2a2 |
SCOP info | TIM beta/alpha-barrel
| (Trans)glycosidases
| Amylase, catalytic domain
|
Resolution | 2.13 |
|
 |
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | A | I | V | I | E | P | V | Q | G | E | G | G | F | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | A | S | S | P | A | F | M | Q | R | L | R | A | L | C | D | E | H | G | I | M | L | I | A | D | E | V | Q |
Query Conservation |   |
  |   |   |
|
|
|
|   |   |   |   |   |   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|   |   |
|
|
|
|
|
|
|   |
|   |
Template Sequence |   |
I | T | A | I | W | I | P | P | A | Y | K | G | N | S | Q | A | D | V | G | Y | G | A | Y | D | L | Y | D | L | G | E | F | N | Q | K | G | T | V | R | T | K | Y | G | T | K | A | Q | L | E | R | A | I | G | S | L | K | S | N | D | I | N | V | Y | G | D | V | V | M |
Template Known Secondary structure |   |
|
|  |  |  |  |
|
|
| S |  |  | S | S | T | T |
|
| S | S | S |  |  |  | T | T |
| S | S |
| S |
| B | T | T | B | S | S |
| S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
37 | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|