Job Description P22256 Confidence 99.93% Date Thu Jan 5 11:38:48 GMT 2012 Rank 115 Aligned Residues 345 % Identity 13% Template d1t3ia_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 1.80

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	.	.	.	.	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A
Query Conservation																																													.	.	.	.
Alig confidence													.	.	.	.																													.	.	.	.
Template Conservation													.	.	.	.
Template Sequence		N	G	H	P	L	V	Y	L	D	N	A	.	.	.	.	A	T	S	Q	K	P	R	A	V	L	E	K	L	M	H	Y	Y	E	N	D	N	A	N	V	G	A	H	Q	L	S	V	R	A	T	D	A	Y	E	A	V	R	N	K	V	A	K	F	I	N	A	R	S	P	R	E	I	V	Y	T	R	N	A	T	E	A
Template Known Secondary structure		T	T							B	T	T	.	.	.	.	T																			T							S																					T	T		S		G	G	G					S	S
Template Predicted Secondary structure													.	.	.	.
Template SS confidence
		25	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		115	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		V	E	N	A	V	K	I	A	R	A	A	.	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N
Query Conservation													.
Alig confidence													.																																												.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Sequence		I	N	L	V	A	Y	S	W	G	M	N	N	L	K	A	G	D	E	I	I	T	T	V	M	E	H	H	S	N	L	V	P	W	Q	M	V	A	A	K	T	G	A	V	L	K	F	V	Q	L	D	E	Q	E	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	E	H	F	K	T	L	L	S	.
Template Known Secondary structure									T							T	T							T	T			G	G	G	T																			B		T	T	S	S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.											.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.															.	.	160	.	.	.	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G
Query Conservation
Alig confidence		.	.	.	.																					.	.	.	.																														.	.	.
Template Conservation		.	.	.	.																					.	.	.	.																														.	.	.
Template Sequence		.	.	.	.	E	K	T	K	L	V	T	V	V	H	I	S	N	T	L	G	C	V	N	P	.	.	.	.	A	E	E	I	A	Q	L	A	H	Q	A	G	A	K	V	L	V	D	A	C	Q	S	A	P	H	Y	P	L	D	.	.	.	V	Q	L	I	D	C	D	W	L	V	A	S	G	H	K	M	C	A	P	T
Template Known Secondary structure		.	.	.	.	T	T								S	B		T	T	T		B	B			.	.	.	.											T	T								T	T	T	T	T	T	S				.	.	.					T		S						G	G	G	T	T	S		T
Template Predicted Secondary structure		.	.	.	.																					.	.	.	.																														.	.	.
Template SS confidence
						168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.				.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.																					.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.
Template Sequence		G	.	I	G	F	L	Y	G	K	E	E	I	L	E	A	M	P	P	F	F	G	G	G	E	M	I	A	E	V	F	F	D	H	F	T	T	G	E	L	P	H	K	F	E	A	G	T	P	A	I	A	E	A	I	A	L	G	A	A	V	D	Y	L	T	D	L	G	M	E	N	I	H	N	Y	E	V	E	L	T	H
Template Known Secondary structure		T	.														S				S		S	T	T	S						S	S							T	T	G	G	G			S	S
Template Predicted Secondary structure			.
Template SS confidence
		237		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.							.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.											.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	.	.	.	.	.	.	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	.	.	.	.	.	.	.	.	.	.	Y	Y	N	V	L
Query Conservation																	.	.	.	.	.	.																																													.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.
Template Sequence		Y	L	W	Q	G	L	G	Q	I	P	Q	L	R	L	Y	G	P	N	P	K	H	G	D	R	A	A	L	A	S	F	N	V	A	G	L	H	A	.	.	.	.	.	.	.	.	.	S	D	V	A	T	M	V	D	Q	D	G	I	A	I	R	S	G	H	H	C	T	Q	P	L	H	R	L	F	D	A	S	G	S	A
Template Known Secondary structure									T		T	T					S			G	G	G	S		B		S							T	T	B			.	.	.	.	.	.	.	.	.									T	T	T				B		S		T	T								T	T
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.										.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
		398	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	S	L	Y	F	Y	N	T	K	E	E	I	D	L	F	L	Q	S	L	Q	A	T	I	R	F
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		387	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions