Return to main results Retrieve Phyre Job Id

Job DescriptionP22256
Confidence100.00%DateThu Jan 5 11:38:48 GMT 2012
Rank1Aligned Residues425
% Identity100%Templated1sffa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.90

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVL
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Template Conservation       
                
       
    
 

   

         

   
 
 

    
           
Template Sequence  NSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVL
Template Known Secondary structure 

S
TTS

SS


BTTT

SST
TT
BT
TTT
S


TTTS
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   2.......10.........20.........30.........40.........50.........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGL
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Template Conservation         


 
           
    




   

  
     
  

     


    
   
            
Template Sequence  AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGL
Template Known Secondary structure 

SS
SS
SST

TT



SSSS

TTTTTTS

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   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  MPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEV
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Template Conservation                           
   
         





      
        
  
  
    
  

 


Template Sequence  MPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEV
Template Known Secondary structure 

SS


BGGGTB
T

GGG
SB
TTTTS
B

T

T
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   162.......170.........180.........190.........200.........210.........220.........230.........240.
 
   242.......250.........260.........270.........280.........290.........300.........310.........320.
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Query Sequence  QSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLL
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Template Conservation    
    
        
   

   

 
                          
        
   
           
Template Sequence  QSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLL
Template Known Secondary structure  TTTTTTTSSSSGGGGTTS

S
GGGGTSS

TTS
TTSS

SSSS
TT
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   242.......250.........260.........270.........280.........290.........300.........310.........320.
 
   322.......330.........340.........350.........360.........370.........380.........390.........400.
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Query Sequence  QKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILV
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Template Conservation                  
      
  
   
                           
   

 
         

   
Template Sequence  QKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILV
Template Known Secondary structure  T
TTTTBGGG
TTSB
TT
STTS


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   322.......330.........340.........350.........360.........370.........380.........390.........400.
 
   402.......410.........420......
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Query Sequence  PLTIEDAQIRQGLEIISQCFDEAKQ
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Template Conservation      
 
 
   
  
   
 
   
Template Sequence  PLTIEDAQIRQGLEIISQCFDEAKQ
Template Known Secondary structure 
TT



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   402.......410.........420......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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