Job Description P22256 Confidence 99.77% Date Thu Jan 5 11:38:48 GMT 2012 Rank 220 Aligned Residues 352 % Identity 14% Template d1rv3a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.40

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80								.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.									.	.	.	.	.	.	.																														.	.	.
Query SS confidence																																		.									.	.	.	.	.	.	.																														.	.	.
Query Sequence		R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	.	L	S	H	T	C	F	Q	V	.	.	.	.	.	.	.	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	.	.	.
Query Conservation																																		.									.	.	.	.	.	.	.																														.	.	.
Alig confidence											.	.						.	.	.														.									.	.	.	.	.	.	.																					.	.								.	.	.
Template Conservation											.	.						.	.	.																																																		.	.
Template Sequence		R	V	G	L	E	L	I	A	S	.	.	E	N	F	A	S	.	.	.	R	A	V	L	E	A	L	G	S	C	L	N	N	K	Y	S	L	G	Y	P	G	Q	R	Y	Y	G	G	T	E	H	I	D	E	L	E	T	L	C	Q	K	R	A	L	Q	A	Y	G	L	D	.	.	P	Q	C	W	G	V	N	V	Q	P
Template Known Secondary structure			S	S					T	T	.	.						.	.	.								T	S	G	G	G	T							T	T			S	S	S																				T	T			.	.	T	T	T
Template Predicted Secondary structure											.	.						.	.	.																																																		.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.			.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.
			110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H
Query Conservation		.
Alig confidence		.															.	.	.																								.	.	.	.	.	.	.
Template Conservation																	.	.	.																								.	.	.	.	.	.	.
Template Sequence		Y	S	G	S	P	A	N	F	A	V	Y	T	A	L	V	.	.	.	E	P	H	G	R	I	M	G	L	D	L	P	D	G	G	H	L	T	H	G	F	M	T	.	.	.	.	.	.	.	D	K	K	K	I	S	A	T	S	I	F	F	E	S	M	A	Y	K	V	N	P	D	T	G	Y	I	D	Y	D	R	L	E
Template Known Secondary structure		S	S													T	.	.	.		T	T								G	G	G	T			G	G	G			B		.	.	.	.	.	.	.	S	S		B		S						S							B		T	T	T		S	B
Template Predicted Secondary structure																	.	.	.																								.	.	.	.	.	.	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K
Query Conservation
Alig confidence								.	.	.																		.	.	.	.	.	.	.
Template Conservation								.	.	.																		.	.	.	.	.	.	.
Template Sequence		E	N	A	R	L	F	.	.	.	H	P	K	L	I	I	A	G	T	S	C	Y	S	R	N	L	D	.	.	.	.	.	.	.	Y	G	R	L	R	K	I	A	D	E	N	G	A	Y	L	M	A	D	M	A	H	I	S	G	L	V	V	A	G	V	V	P	S	P	F	E	H	C	H	V	V	T	T	T	T	H	K
Template Known Secondary structure								.	.	.			S							S	S			S				.	.	.	.	.	.	.											T	T								T	T	T							T	S	S			G	G	G	T		S						S	S	G
Template Predicted Secondary structure								.	.	.																		.	.	.	.	.	.	.
Template SS confidence
		188	.	190	.	.	.				.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210								.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.									.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure																	.	.	.	.	.	.	.	.
Query SS confidence																	.	.	.	.	.	.	.	.
Query Sequence		S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	.	.	.	.	.	.	.	.	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E
Query Conservation																	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	L	R	G	C	R	A	G	M	I	F	Y	R	R	G	V	R	S	E	I	L	Y	N	L	E	S	L	I	N	S	A	V	F	P	G	L	Q	G	G	P	H	N	H	A	I	A	G	V	A	V	A	L	K	Q	A	M	T	P	E	F	K	E	Y	Q	R	Q	V	V	A	N	C	R	A	L	S	A	A	L	V	E
Template Known Secondary structure		G	G				S									S	B					B												T	T	T	T			S																	T	S
Template Predicted Secondary structure
Template SS confidence
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.								.	.	.	.	.	.	.	.					400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.									.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.									.	.	.	.
Query Sequence		K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	.	.	.	.	.	.	.	P	Y	Y	N	V	L	R	I	.	.	.	.	L	V	P	L	T	I	E	D	A	Q
Query Conservation																																																					.	.	.	.	.	.	.									.	.	.	.
Alig confidence																												.	.	.	.	.	.	.																			.	.	.	.	.	.	.									.	.	.	.
Template Conservation																												.	.	.	.	.	.	.
Template Sequence		L	G	Y	K	I	V	T	G	G	S	D	N	H	L	I	L	V	D	L	R	S	K	G	T	D	G	.	.	.	.	.	.	.	G	R	A	E	K	V	L	E	A	C	S	I	A	C	N	K	N	T	C	P	G	D	K	S	A	L	R	P	S	G	L	R	L	G	T	P	A	L	T	S	R	G	L	L	E	K	D
Template Known Secondary structure		T	T				G	G	G	S		S	S	S						G	G	G	G	T				.	.	.	.	.	.	.										T	T									S	S		S		T	T	S														T	T
Template Predicted Secondary structure																												.	.	.	.	.	.	.
Template SS confidence
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370								.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	R	Q	G	L	E	I	I	S	Q	C	F	D	E	A	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	Q	K	V	A	H	F	I	H	R	G	I	E	L	T	V	Q
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		418	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions