Return to main results Retrieve Phyre Job Id

Job DescriptionP22256
Confidence99.96%DateThu Jan 5 11:38:48 GMT 2012
Rank63Aligned Residues358
% Identity18%Templated1qz9a_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution1.85

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  NSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVL
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Template Sequence  TTRNDCLALDAQDSLAPLRQQFAL. . . . . . . . . . . . PEGVIYLDGNS. . . . . . LGARPVAALARAQAVIAEEWGNGLIRS
Template Known Secondary structure 

T
TTGGGGGGB

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TT


TTT......S


BTTT




GGG
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   2.......10.........20..... ....30...... ...40.........50.........60...
 
   82.......90.........100.........110.........120... ......130.........140.........150.
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Query Sequence  . . . . . AYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIAR. . . . . AATKRSGTIAFSGAYHGRTHYTLALTGK
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Template Sequence  WNSAGWRDLSERLGNRLATLIGAR. DGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADM
Template Known Secondary structure  TSGGGTTTT

.TTS
S
STT

TTS
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   64.....70.........80....... ..90.........100.........110.........120.........130.........140..
 
   152.......160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  VNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDE
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Template Sequence  LQQGYTLRLV. . . . . . . . . . . . . . . . . . . . DSPEELPQAID. . . . . QDTAVVMLTHVNYKTGYMHD. . . . MQALTALSHE
Template Known Secondary structure 
SS
....................SSGGG
S.....TTSB
TTT
BB

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   143......150.. .......160... ......170.........180... ......190...
 
   232.......240.........250.........260.........270 .........280.........290......
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Query Sequence  HGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSI. AGGFPLAGVTGRAEVMDAVAPGGLGG. . . . . . . . . . . . . .
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Template Sequence  CGALAIWDLAHS. . . AGAVPVDLHQAGADYAIGCTYKYLNGGPGSQAFVWVSPQLCDLVPQPLSGWFGHSRQFAMEPRYE
Template Known Secondary structure  T

TTT...TTTS


T
S
SSSTT


TT



TTTTTTS

S


GGGB
TTS


SS

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   194.....200..... ....210.........220.........230.........240.........250.........260.........270
 
   297..300.........310....... ..320.........330.........340... ......350.........360
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Query Sequence  . . . . . . . . . TYAGNPIACVAALEVLKVFEQ. . . ENLLQKANDLGQKLKDGLLAIAEKHP. . . . EIGDVRGLGAMIAIELF
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Template Conservation                        
                   
   
   
       
     
         
     
Template Sequence  PSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLRRKSLALTDLFIELVEQRCAAHELTLVTPREHAKRGSHVSFEHP
Template Known Secondary structure  B
SSGGGG

S


TTS
TTS


S
SSGGGB
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T
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   271........280.........290.........300.........310.........320.........330.........340.........350
 
   361........370.........380.........390.........400. ........410.........420...
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Query Sequence  EDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILV. PLTIEDAQIRQGLEIISQCFDE
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Template Sequence  E. . . . . . . . . . . GYAVIQALIDRGVIGDYRE. . PRIMRFGFTPLYTTFTEVWDAVQILGEILDR
Template Known Secondary structure  T...........TTT
T..TT

TTT

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   351 ........360.........370 .........380.........390.........400.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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