Return to main results Retrieve Phyre Job Id

Job DescriptionP22256
Confidence99.91%DateThu Jan 5 11:38:48 GMT 2012
Rank148Aligned Residues320
% Identity14%Templated1mdoa_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5960.........70.........80.........90.........100.........110.........120.........130........
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Query Sequence  HPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAY
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Template Sequence  GAEELAAVKTVLDSG. . . . . WITTGPKNQELEAAFCRLTG. . . NQYAVAVSSATAGXHIALXAL. . GIGEGDEVITPSXT
Template Known Secondary structure 
T.....

SSS
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SS
T..T

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   1920.........30... ......40.........50... ......60.........70.... .....80........
 
   139140.........150.........160.........170.........180.........190.........200.........210........
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Query Sequence  HGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASS
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Template Sequence  WVSTLNXIVLLGANPVXVDVDRDTLXV. . . . . . . . . . . . . . . . . TPEHIEAAITPQ. . . . . . . . TKAIIPVHYAGAPAD.
Template Known Secondary structure 
TT

B
TTT

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B
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   8990.........100.........110..... ....120....... ..130.........140..
 
   219220.........230.........240.........250.........260.........270.........280.........290...
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Query Sequence  PAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGG. . . . .
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Template Sequence  . . . LDAIYALGERYGIPVIEDAAHA. TGTSYKGRHIGARGTAIFSFHAIKNITCAEGGIVVTDNPQFADKLRSLKFHGLG
Template Known Secondary structure  ...T

B

TT
.TT
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   143......150.........160.... .....170.........180.........190.........200.........210........
 
   294.....300.........310.........320.........330.........340.........350.........360.......
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Query Sequence  . . . . . . LGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNK
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Template Sequence  VDQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAAIAAQYHQAXADLPFQPLSLPSWEHIHAWHLFIIRVDEARCG
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SS


B



TTSS




SS



S


S
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   219220.........230.........240.........250.........260.........270.........280.........290........
 
   368.370.........380.........390... ......400.........410.........420.
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Query Sequence  PDAKLTAEIVARARDKGLILLSCGPY. . . . . . . . . . . . . . . . . . . . . . . YNVLRILVPLTIEDAQIRQGLEIISQCF
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Template Sequence  ITR. . . DALXASLKTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERICSLPLFPDXTESDFDRVITALHQIA
Template Known Secondary structure  S
...TTB

B




GGGSSTT


TT


TT

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   310.. .......320.........330.........340.........350.........360.........370.........380...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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