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Job DescriptionP22256
Confidence99.85%DateThu Jan 5 11:38:48 GMT 2012
Rank196Aligned Residues295
% Identity12%Templated1ibja_
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   74.....80.........90.........100.........110.........120.........130.........140.........150...
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Query Sequence  SHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVN
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Template Sequence  GPYDYTRSGNPTRDALESLLAKLDK. . . ADRAFCFTSGMAALSAVT. . . HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSG
Template Known Secondary structure 
S
SBTTT

T...
SSS...TTS
TT
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TSGGGT
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   123......130.........140....... ..150.........160..... ....170.........180.........190......
 
   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  PYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHG
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Template Sequence  VVVKRVNT. . . . . . . . . . . . . . . . . . . . TKLDEVAAAIG. . . . . PQTKLVWLESPTNPRQQISD. . . . IRKISEMAHAQG
Template Known Secondary structure 

T....................TS

.....SS
SS
TTT




....TTT
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   197..200.... .....210..... ....220.........230..... ....240.......
 
   234.....240.........250.........260.........270..... ....280.........290.........300.........310
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Query Sequence  IMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFP. . . LAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALE
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Template Sequence  ALVLVDNSIM. . . . SPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLR
Template Known Secondary structure 

TTT....
TTT

GGGTT
STTTTTT
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STT
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   248.250....... ..260.........270.........280.........290.........300.........310.........320...
 
   311........320.........330.........340........ .350.........360.........370..
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Query Sequence  VLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDV. . . . . . . . . . . . . . . . . . RGLGAMIAIELFEDGDHNKPDAKL
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Template Sequence  GIK. . . . . . TMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT. . . . . . . . GSVAL
Template Known Secondary structure  T......TT
TT


TTSTTSTTTTT
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   324.. ...330.........340.........350.........360.........370.........380.... .....
 
   373......380.........390... ......400.........410.........420.....
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Query Sequence  TAEIVARARDKGLILLSCGPY. . . . . . . . . . . . . . . . . . . . . . . . . YNVLRILVPLTIEDAQIRQGLEIISQCFDEAK
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Template Sequence  SKHLVETTKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGI. . . . EDVDDLISDLDIAFKTFP
Template Known Secondary structure 
SSS
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SSS

TTTTTT
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SSSSSSSS

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   390.........400.........410.........420.........430.........440..... ....450.........460...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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