Job Description P22256 Confidence 99.97% Date Thu Jan 5 11:38:48 GMT 2012 Rank 57 Aligned Residues 358 % Identity 14% Template d1c7ga_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.								.	.	.																										.	.	.
Template Conservation																			.	.	.	.	.	.	.								.	.	.																										.	.	.
Template Sequence		K	D	I	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	.	.	.	.	.	.	.	D	K	Q	W	A	G	M	.	.	.	M	I	G	D	E	A	Y	A	G	S	E	N	F	Y	H	L	E	K	T	V	K	E	L	F	G	.	.	.	F	K	H	I	V	P	T	H	Q	G	R	G	A	E	N	L	L	S
Template Known Secondary structure		G	G		S				S		S	S	S						.	.	.	.	.	.	.							T	.	.	.	T	S					S	S	S																	.	.	.		S						S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.								.	.	.																										.	.	.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.				90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D
Query Conservation
Alig confidence						.	.	.																																																.	.	.	.	.	.	.	.	.													.
Template Conservation						.	.	.																																																.	.	.	.	.	.	.	.	.													.
Template Sequence		Q	L	A	I	.	.	.	K	P	G	Q	Y	V	A	G	N	M	Y	F	T	T	T	R	F	H	Q	E	K	N	G	A	T	F	V	D	I	V	R	D	E	A	H	D	A	S	L	N	L	P	F	K	G	D	I	.	.	.	.	.	.	.	.	.	D	L	N	K	L	A	T	L	I	K	E	K	.	G	A	E	N
Template Known Secondary structure						.	.	.		T	T						S	S												T	T							B		G	G	G	G		T	T				S		T	T		B	.	.	.	.	.	.	.	.	.													.		G	G	G
Template Predicted Secondary structure						.	.	.																																																.	.	.	.	.	.	.	.	.													.
Template SS confidence
		108	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.										.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.													.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	Y	I	C	L	A	V	T	V	N	L	A	G	G	Q	P	V	S	M	A	N	M	R	A	V	H	E	M	A	S	T	Y	G	I	K	I	F	Y	D	A	T	R	C	V	E	N	A	Y	F	I	K	E	Q	E	A	G	Y	E	N	V	S	I	K	D	I	V	H	E	M	F	S	Y	A	D	G	C	T	M	S
Template Known Secondary structure									S	S	B	T	T	T	T	S	B																		T								T	T												S	T	T		T	T	S											T	T		S
Template Predicted Secondary structure
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
		268	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
Predicted Secondary structure										.																	.	.	.	.	.	.
Query SS confidence										.																	.	.	.	.	.	.
Query Sequence		K	S	I	A	G	G	F	P	.	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	.	.	.	.	.	.	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E
Query Conservation										.																	.	.	.	.	.	.
Alig confidence										.																	.	.	.	.	.	.																																																.	.
Template Conservation																																																																																.	.
Template Sequence		G	K	K	D	C	L	V	N	I	G	G	F	L	C	M	N	D	E	E	M	F	S	A	A	K	E	L	V	V	V	Y	E	G	M	P	S	Y	G	G	L	A	G	R	D	M	E	A	M	A	I	G	L	R	E	A	M	Q	Y	E	Y	I	E	H	R	V	K	Q	V	R	Y	L	G	D	K	L	R	E	A	.	.
Template Known Secondary structure		T	T	T	T	T			S	S							S																T			T	T	T	T	T																	T																						T	.	.
Template Predicted Secondary structure																																																																																.	.
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.																.	.	.	.	.	.	.	.	400		.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Query Sequence		K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	N	V	L	R	I	L	.	V	P	L	T
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Alig confidence																																.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																.
Template Sequence		G	V	P	I	V	E	P	T	G	G	H	A	V	F	L	D	A	R	R	F	C	P	H	L	T	Q	D	Q	F	P	.	A	Q	S	L	A	A	S	I	Y	M	E	T	G	V	R	S	M	E	R	G	I	V	S	A	G	R	S	K	E	T	G	E	N	H	R	P	K	L	E	T	V	R	L	T	I	P	R	R	V
Template Known Secondary structure		T			B		S	S			S	S											T	T	S		G	G	G			.													S							S						B		S	S	S			B				S										T	T	S
Template Predicted Secondary structure																																.
Template SS confidence
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.		.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.
		405	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E	A	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	T	Y	A	H	M	D	V	V	A	D	G	I	I	K	L	Y	Q	H	K	E	D
Template Known Secondary structure																			T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		412	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions