Phyre 2 alignment of P22256 with d1b5pa

Job Description P22256
Confidence 99.96% Date Thu Jan 5 11:38:48 GMT 2012

Rank 60 Aligned Residues 346

% Identity 16% Template d1b5pa_

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 1.80

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																			.																													.
Query SS confidence																																			.																													.
Query Sequence	E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	.	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	.	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E
Query Conservation																																			.																													.
Alig confidence												.	.						.																.																													.
Template Conservation												.	.						.
Template Sequence	Q	G	V	D	L	V	A	L	T	A	G	.	.	E	P	D	F	D	.	T	P	E	H	V	K	E	A	A	R	R	A	L	A	Q	G	K	T	K	Y	A	P	P	A	G	I	P	E	L	R	E	A	L	A	E	K	F	R	R	E	N	G	L	S	V	T	P	E	E	T	I	V	T	V	G	G	S	Q	A	L	F
Template Known Secondary structure	T	T									S	.	.	S		S	S		.															T	T			S				T	T																T	T						G	G	G					S
Template Predicted Secondary structure												.	.						.
Template SS confidence
	29	30	.	.	.	.	.	.	.	.	.			40	.	.	.	.		.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

	117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A
Query Conservation
Alig confidence							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence	N	L	F	Q	A	I	.	.	.	L	D	P	G	D	E	V	I	V	L	S	P	Y	W	V	S	Y	P	E	M	V	R	F	A	G	G	V	V	V	E	V	E	T	L	P	E	E	G	F	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	P	E	R	V	R	R	A	I	T	P	R	.	.
Template Known Secondary structure							.	.	.			T	T								S			T									T	T										G	G	G	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T			T	T	.	.
Template Predicted Secondary structure							.	.	.																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
	106	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.																	.	.	.	.	.	.	.	160	.	.	.	.

	197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.			.	.	.	.	.	270	.		.	.
Predicted Secondary structure																																																																					.	.								.
Query SS confidence																																																																					.	.								.
Query Sequence	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	.	.	T	F	A	K	S	I	A	.	G	G
Query Conservation																																																																					.	.								.
Alig confidence	.	.	.	.																																																																	.	.								.
Template Conservation	.	.	.	.
Template Sequence	.	.	.	.	T	K	A	L	V	V	N	S	P	N	N	P	T	G	A	V	Y	P	K	E	V	L	E	A	L	A	R	L	A	V	E	H	D	F	Y	L	V	S	D	E	I	Y	E	H	L	L	Y	E	G	E	H	F	S	P	G	R	V	A	P	E	H	T	L	T	V	N	G	A	A	K	A	F	A	M	T	G
Template Known Secondary structure	.	.	.	.								S	S		T	T	T																			T	T								T	T	T	T		B	S	S	S					G	G	G	T		T	T	T							S	T	T	T	T	T		G	G
Template Predicted Secondary structure	.	.	.	.
Template SS confidence
					165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240

	274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure																																									.
Query SS confidence																																									.
Query Sequence	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	.	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G
Query Conservation																																									.
Alig confidence																																									.
Template Conservation
Template Sequence	W	R	I	G	Y	A	C	G	P	K	E	V	I	K	A	M	A	S	V	S	R	Q	S	T	T	S	P	D	T	I	A	Q	W	A	T	L	E	A	L	T	N	Q	E	A	S	R	A	F	V	E	M	A	R	E	A	Y	R	R	R	R	D	L	L	L	E	G	L	T	A	L	G	L	K	A	V	R	P	S	G	A
Template Known Secondary structure	G																					T	T	T		S																																													T			B				S	B	T
Template Predicted Secondary structure
Template SS confidence
	241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320

	353	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.			.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	Y	.	.	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F
Query Conservation																																											.	.
Alig confidence														.	.	.	.	.	.	.																							.	.									.	.
Template Conservation														.	.	.	.	.	.	.																																	.	.
Template Sequence	F	Y	V	L	M	D	T	S	P	I	A	P	D	.	.	.	.	.	.	.	E	V	R	A	A	E	R	L	L	E	A	G	V	A	V	V	P	G	T	D	F	A	A	F	G	H	V	R	L	S	Y	A	.	.	T	S	E	E	N	L	R	K	A	L	E	R	F	A	R	V	L
Template Known Secondary structure	T							T	T	T		S	S	.	.	.	.	.	.	.											T	T						S	G	G	G	T		T	T								.	.	S												G	G	G	G
Template Predicted Secondary structure														.	.	.	.	.	.	.																																	.	.
Template SS confidence
	321	.	.	.	.	.	.	.	.	330	.	.	.								.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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