Job Description P22256 Confidence 99.95% Date Thu Jan 5 11:38:48 GMT 2012 Rank 77 Aligned Residues 360 % Identity 13% Template d1ax4a_ SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 2.10

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V
Query Conservation
Alig confidence																			.	.	.	.	.	.	.														.	.	.																				.	.	.
Template Conservation																			.	.	.	.	.	.	.														.	.	.																				.	.	.
Template Sequence		S	A	V	Y	I	D	L	L	T	D	S	G	T	N	A	M	S	.	.	.	.	.	.	.	D	H	Q	W	A	A	M	I	T	G	D	E	A	.	.	.	Y	A	G	S	R	N	Y	Y	D	L	K	D	K	A	K	E	L	F	N	.	.	.	Y	D	Y	I	I	P	A	H	Q	G	R	G	A	E	N	I	L	F
Template Known Secondary structure		G	G		S				S		S	S	S						.	.	.	.	.	.	.									T					.	.	.	S	S	S																	.	.	.								S	S
Template Predicted Secondary structure																			.	.	.	.	.	.	.														.	.	.																				.	.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.								.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90				.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		K	I	A	R	A	A	.	.	.	.	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.																																																		.	.	.	.	.	.	.	.													.
Template Conservation																																																													.	.	.	.	.	.	.	.													.
Template Sequence		P	V	L	L	K	Y	K	Q	K	E	G	K	A	K	N	P	V	F	I	S	N	F	H	F	D	T	T	A	A	H	V	E	L	N	G	C	K	A	I	N	I	V	T	E	K	A	F	D	S	E	T	Y	D	D	W	K	G	D	F	.	.	.	.	.	.	.	.	D	I	K	K	L	K	E	N	I	A	Q	H	.
Template Known Secondary structure											T	T			S	S						S	S												T	T							B		G	G	G	G		T	T	S			T	T	T	T		B	.	.	.	.	.	.	.	.													.
Template Predicted Secondary structure																																																													.	.	.	.	.	.	.	.													.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.									.	.	170	.	.	.	.	.	.	.	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.													.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L
Query Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	A	D	N	I	V	A	I	V	S	T	V	T	C	N	S	A	G	G	Q	P	V	S	M	S	N	L	K	E	V	Y	E	I	A	K	Q	H	G	I	F	V	V	M	D	S	A	R	F	C	E	N	A	Y	F	I	K	A	R	D	P	K	Y	K	N	A	T	I	K	E	V	I	F	D	M	Y	K	Y	A	D	A
Template Known Secondary structure			G	G	G								S	S	B	T	T	T	T	S	B																		T								T	T													G	G	G	T	T											G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.				.	.	.	.	.	.	.	.	290	.	.	.						.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.
Predicted Secondary structure																				.	.	.													.	.	.	.	.
Query SS confidence																				.	.	.													.	.	.	.	.
Query Sequence		T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	.	.	.	R	A	E	V	M	D	A	V	A	P	G	G	.	.	.	.	.	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L
Query Conservation																				.	.	.													.	.	.	.	.
Alig confidence							.													.	.	.													.	.	.	.	.
Template Conservation							.
Template Sequence		L	T	M	S	A	.	K	D	P	L	L	N	I	G	G	L	V	A	I	R	D	N	E	E	I	F	T	L	A	R	Q	R	C	V	P	M	E	G	F	V	T	Y	G	G	L	A	G	R	D	M	A	A	M	V	Q	G	L	E	E	G	T	E	E	E	Y	L	H	Y	R	I	G	Q	V	K	Y	L	G	D	R	L
Template Known Secondary structure							.						S	S							S	S																T		S	T	T	T	T	T																T	T
Template Predicted Secondary structure							.
Template SS confidence
		260	.	.	.	.		.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.
		336	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.																.	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	.	G	L	I	L	L	S	C	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	Y	Y	N	V	L	R	I
Query Conservation																																																		.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence					.	.															.	.																												.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.															.	.
Template Sequence		R	E	A	.	.	G	I	P	I	Q	Y	P	T	G	G	H	A	V	F	.	.	V	D	C	K	K	L	V	P	Q	I	P	G	D	Q	F	P	A	Q	A	V	I	N	A	L	Y	L	E	S	G	V	R	A	V	E	I	G	S	F	L	L	G	R	D	P	A	T	G	E	Q	K	H	A	D	M	E	F	M	R	L
Template Known Secondary structure				T	.	.	T			B		S	S			S	S				.	.			S	T	T	T		T	T	S		G	G	G																						S						B		T	T	T		S	B				S
Template Predicted Secondary structure					.	.															.	.
Template SS confidence
		340	.	.			.	.	.	.	.	.	.	350	.	.	.	.	.	.			.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.
		400		.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		L	.	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E	A	K	Q
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		T	I	A	R	R	V	Y	T	N	D	H	M	D	Y	I	A	D	A	L	I	G	L	K	E	K	F	A	T
Template Known Secondary structure					T	T	S	S														T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		416	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions