Job Description P22256 Confidence 99.85% Date Thu Jan 5 11:38:48 GMT 2012 Rank 194 Aligned Residues 291 % Identity 16% Template c3qi6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:cystathionine gamma-synthase metb (cgs); PDBTitle: crystal structure of cystathionine gamma-synthase metb (cgs) from2 mycobacterium ulcerans agy99 Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y
Query Conservation
Alig confidence																									.	.	.																						.	.
Template Conservation																									.	.	.																						.	.
Template Sequence		Y	E	Y	A	R	T	G	N	P	T	R	T	A	L	E	A	A	L	A	A	V	E	D	.	.	.	A	A	F	G	R	A	F	S	S	G	M	A	A	A	D	C	A	L	R	A	M	.	.	L	R	P	G	D	H	V	V	I	P	D	D	A	Y	G	G	T	F	R	L	I	D	K	V	F	T	G	W	N	V	E
Template Known Secondary structure		B		B	T	T	T																T	T	.	.	.		S						S	S													.	.			T	T							T	T												T	G	G	G	G	T
Template Predicted Secondary structure																									.	.	.																						.	.
Template SS confidence
		54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.				.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																					.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																					.	.	.	.
Template Sequence		Y	T	P	V	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	L	D	A	V	R	A	A	I	R	.	.	.	.	.	P	T	T	R	L	I	W	V	E	T	P	T	N	P	L	L	S	I	A	D	.	.	.	.	I	A	G	I	A	Q	L	G	A	D	S	S	A	K
Template Known Secondary structure							T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T											.	.	.	.	.	T	T								S	S		T	T	T						.	.	.	.											T	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																					.	.	.	.
Template SS confidence
		129	130	.	.	.	.																					.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.			.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence		L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	.	.	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K
Query Conservation																																										.	.
Alig confidence										.	.	.	.																													.	.
Template Conservation										.	.	.	.
Template Sequence		V	L	V	D	N	T	F	A	.	.	.	.	S	P	A	L	Q	Q	P	L	S	L	G	A	D	V	V	L	H	S	T	T	Y	I	G	G	H	S	D	V	V	G	G	A	L	V	T	N	D	E	E	L	D	Q	S	F	A	F	L	Q	N	G	A	G	A	V	P	G	P	F	D	A	Y	L	T	M	R	G	L	K
Template Known Secondary structure							T	T	T	.	.	.	.		T	T	T			G	G	G	G	T		S										S		S	S										S																																T
Template Predicted Secondary structure										.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.																			.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	T	L	V	L	R	M	Q	R	H	S	E	N	A	A	A	V	A	E	F	L	A	E	H	P	A	I	S	T	V	L	Y	P	G	L	P	S	H	P	G	H	A	V	A	A	R	Q	M	R	G	F	G	G	M	V	S	V	R	M	R	A	.	.	.	.	.	.	.	G	R	T	A	A	E	Q
Template Known Secondary structure		.	.	.	.	.	.	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Template SS confidence
								257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.								.	.	.	320	.	.	.
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																		.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F
Query Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																															.	.	.	.
Template Sequence		L	C	A	K	T	N	I	F	I	L	A	E	S	L	G	S	V	E	S	L	I	E	H	P	S	A	M	T	G	S	Q	L	E	V	P	D	D	L	V	R	L	S	V	G	I	.	.	.	.	E	D	V	A	D	L	L	D	D	L	K	Q	A	L
Template Known Secondary structure							S	S	S				S					S	S						T	T	T					S					T	T								S	.	.	.	.	S
Template Predicted Secondary structure																																															.	.	.	.
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.					.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions