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Job DescriptionP22256
Confidence99.96%DateThu Jan 5 11:38:48 GMT 2012
Rank74Aligned Residues356
% Identity11%Templatec3op7A_
PDB info PDB header:transferaseChain: A: PDB Molecule:aminotransferase class i and ii; PDBTitle: crystal structure of a plp-dependent aminotransferase (zp_03625122.1)2 from streptococcus suis 89-1591 at 1.70 a resolution
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2930.........40.........50.........60.........70.........80.........90.........100........
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Query Sequence  RAENCRVWDVEGREYLDFAGGIAVLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLV
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Template Sequence  VHENSAIYDIAGVSISSLTLEELFALS. . . . GTNPEDFYKKLQGTKLNYGWIEGSP. . . AFKKSVSQLYTGVKPEQILQT
Template Known Secondary structure  GGG
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   14.....20.........30.........40 .........50.........60..... ....70.........80......
 
   109110.........120.........130.........140.........150.........160.........170.........180........
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Query Sequence  TTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIH
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Template Sequence  NGATGANLLVLYSL. . . IEPGDHVISLYPTYQQLYDIPKSLGAEVDLWQIEEENGWLP. . . . . . . . . . . . . . . . DLEKLR
Template Known Secondary structure  S...

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   87..90.........100 .........110.........120.........130.........140. ......
 
   189190.........200.........210.........220.........230.........240.........250.........260........
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Query Sequence  RIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAK
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Template Sequence  QLIRPTTK. . . . . . XICINNANNPTGAVXDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSIIEVYDKGIAVNSLST
Template Known Secondary structure 

TT

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   148.150..... ....160.........170.........180.........190.........200.........210.........220.
 
   269270.........280.........290.........300.........310.........320.........330.........340........
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Query Sequence  SIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDV
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Template Sequence  YSLPGIRIGWVAANHQVTDILRDYRDYTXICAGVFDDLVAQLALA. . HYQEILERNRHILEENLAILDQWIEEEPLVSYI
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S
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   223......230.........240.........250.........260....... ..270.........280.........290.........300
 
   349350... ......360.........370.........380.........390.........400.........410.........420.....
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Query Sequence  RGLGA. MIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQCFDEAK
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Template Sequence  RPAVVSTSFVKIAVDXPXE. . . . . . . DFCLQLLQEHGVLLVPGNRFERDGYVRLGFACEQETLIKGLEKLSQFLRRFD
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SSSS


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   301........310......... 320.........330.........340.........350.........360.........370.
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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