Job Description P22256 Confidence 99.97% Date Thu Jan 5 11:38:48 GMT 2012 Rank 58 Aligned Residues 349 % Identity 10% Template c3kaxB_ PDB info PDB header:lyase Chain: B: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative c-s lyase from bacillus anthracis Resolution 1.70 Å

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		36	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure					.																																																															.
Query SS confidence					.																																																															.
Query Sequence		W	D	V	.	E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	.	F	A	K	K	T	L	L	V	T	T	G	S	E
Query Conservation					.																																																															.
Alig confidence					.												.	.	.																															.																		.
Template Conservation																	.	.	.																															.
Template Sequence		W	D	T	Y	K	N	E	E	L	I	H	A	W	I	A	.	.	.	D	X	D	F	E	V	P	Q	P	I	Q	T	A	L	K	K	R	I	E	H	P	I	F	G	Y	T	L	P	P	E	.	N	I	G	D	I	I	C	N	W	T	K	K	Q	Y	N	W	D	I	Q	K	E	W	I	V	F	S	A	G	I	V	P
Template Known Secondary structure				T	T	T	T	S								S	.	.	.	S		S	S															T	S										T	.	T																			G	G	G					S
Template Predicted Secondary structure																	.	.	.																															.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.				.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.		.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N
Query Conservation
Alig confidence											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Sequence		A	L	S	T	S	I	Q	A	F	.	.	.	T	K	E	N	E	S	V	L	V	Q	P	P	I	Y	P	P	F	F	E	X	V	T	T	N	N	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	L	C	V	S	P	L	Q	K	Q	N	D	T	Y	A	I	D	F	E	H	L	E	K	Q	F	Q	.
Template Known Secondary structure											.	.	.			T	T							S	S												T	T		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								B		S	S	S	S		B												.
Template Predicted Secondary structure											.	.	.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template SS confidence
		94	.	.	.	.	.	100	.	.				.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		194	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.							.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	.	.	.	.	.	.	E	Q	M	G	V	A	P	D	L	T	T	F	A
Query Conservation																																																															.	.	.	.	.	.
Alig confidence		.	.	.	.																	.																																									.	.	.	.	.	.
Template Conservation		.	.	.	.																	.
Template Sequence		.	.	.	.	Q	G	V	K	L	X	L	L	C	S	P	H	N	P	I	G	.	R	V	W	K	K	E	E	L	T	K	L	G	S	L	C	T	K	Y	N	V	I	V	V	A	D	E	I	H	S	D	I	I	Y	A	D	H	T	H	T	P	F	A	S	L	S	E	E	L	A	A	R	T	I	T	C	X	A	P	S
Template Known Secondary structure		.	.	.	.	T	T								S	S	B	T	T	T	T	.	B																	T	T								T	T	T	T		B		T	T						G	G	G	S						T	T							S	S
Template Predicted Secondary structure		.	.	.	.																	.
Template SS confidence
						155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		268	.	270	.		.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.
Predicted Secondary structure						.																																																																									.	.
Query SS confidence						.																																																																									.	.
Query Sequence		K	S	I	A	.	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	.	.	E
Query Conservation						.																																																																									.	.
Alig confidence						.																																																																									.	.
Template Conservation
Template Sequence		K	T	F	N	I	A	G	L	Q	A	S	I	I	I	I	P	N	E	K	L	R	Q	A	F	T	S	I	Q	Y	R	Q	G	F	H	G	L	N	I	F	A	Y	T	A	X	Q	S	A	Y	T	E	C	N	D	W	L	N	E	I	R	F	Y	I	E	D	N	A	K	F	A	C	E	Y	I	K	D	H	I	P	T	L
Template Known Secondary structure		T	G	G	G		G	G	G																							T	T																T	T	S																												T	T
Template Predicted Secondary structure
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
		345	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.					390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.							.	.	.	.
Query SS confidence																																									.							.	.	.	.
Query Sequence		I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	.	G	L	I	L	L	S	.	.	.	.	C	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q
Query Conservation																																									.							.	.	.	.
Alig confidence																								.	.	.	.	.	.	.											.							.	.	.	.														.	.
Template Conservation																								.	.	.	.	.	.	.																																			.	.
Template Sequence		S	V	X	K	P	E	G	S	F	L	L	W	I	D	C	S	A	L	N	L	S	Q	.	.	.	.	.	.	.	D	E	R	T	K	L	L	E	E	K	G	K	I	I	V	E	P	G	E	K	Y	G	L	G	G	E	E	H	I	G	I	N	I	G	.	.	C	P	R	S	V	L	E	E	I	L	N	R	L	R	H
Template Known Secondary structure							S	B	S	S							G	G	G					.	.	.	.	.	.	.											S							S	G	G	G		T	T	T	T	T							S	.	.	S
Template Predicted Secondary structure																								.	.	.	.	.	.	.																																			.	.
Template SS confidence
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.								.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.			.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
		420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F
Template Known Secondary structure			T
Template Predicted Secondary structure
Template SS confidence
		381	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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