Job Description P22256 Confidence 99.84% Date Thu Jan 5 11:38:48 GMT 2012 Rank 201 Aligned Residues 320 % Identity 9% Template c3ju7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:putative plp-dependent aminotransferase; PDBTitle: crystal structure of putative plp-dependent aminotransferase2 (np_978343.1) from bacillus cereus atcc 10987 at 2.19 a resolution Resolution 2.19 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H
Query Conservation
Alig confidence																						.	.	.	.																		.																						.	.
Template Conservation																						.	.	.	.																		.																						.	.
Template Sequence		I	E	Y	L	D	E	L	K	E	I	D	A	S	H	I	Y	T	N	Y	G	.	.	.	.	P	I	N	Q	R	F	E	Q	T	I	X	S	G	F	F	Q	N	.	R	G	A	V	T	T	V	A	N	A	T	L	G	L	X	A	A	I	Q	L	K	.	.	K	R	K	K	G	K	Y	A	L	X	P	S	F	T	F
Template Known Secondary structure		G	G	T											T			S	S	S		.	.	.	.														T	S	T	T	.		S						S														.	.	S		T	T								S	S	S
Template Predicted Secondary structure																						.	.	.	.																		.																						.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.					.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																				.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																				.	.
Template Sequence		P	A	T	P	L	A	A	I	W	C	G	L	E	P	Y	F	I	D	I	S	I	D	D	W	Y	X	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	T	V	L	W	D	K	I	E	E	.	.	.	.	.	L	K	E	E	V	A	I	V	V	P	Y	A	T	F	G	S	W	X	N	.	.
Template Known Secondary structure		T									T	T								B		T	T	T		S	B	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.		G	G	G							B		T	T	T	B				.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.																				.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																		.	.	.	.	.	.	120	.	.	.	.						.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence		.	.										.													.																																																					.	.	.
Template Conservation		.	.										.													.
Template Sequence		.	.	L	E	E	Y	E	E	L	E	K	.	K	G	V	P	V	V	V	D	A	A	P	G	.	F	G	L	X	N	G	G	X	H	Y	G	Q	D	F	S	G	X	I	I	Y	S	F	H	A	T	P	F	G	I	G	E	G	G	L	I	Y	S	K	N	E	E	D	I	Q	R	I	K	R	X	G	N	F	G	F	D
Template Known Secondary structure		.	.										.		T			B					T	T		.	T	T				T	T			T	T	T	T		S	S							B							B	S							S												T	B	T	T	B
Template Predicted Secondary structure		.	.										.													.
Template SS confidence
				144	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.		.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
										297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																																																.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.
Template Sequence		T	N	R	E	C	T	X	X	G	F	N	C	K	X	S	E	Y	A	A	A	I	G	I	A	T	X	K	K	W	D	D	K	L	K	E	R	T	R	I	S	E	W	Y	K	Q	L	L	Q	S	N	G	L	X	K	K	G	W	Q	L	Q	K	T	E	A	V	I	Q	Q	F	X	P	.	.	.	.	.	I	L	C	P
Template Known Secondary structure		T	T	S		B		S				B																																							T	T	T	T	T	T	T		B					S		B			S	S			.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.						.	.	.	.
		369	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.																								.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	V	R	N	K	Q	V	I	E	D	L	K	K	Q	K	I	E	A	R	L	Y	F	S	P	S	C	H	Q	Q	V	L	F	R	N	Y	K	S	T	D	L	T	R	T	N	K	I	A	K	R	I	V	S	L	P	L	W	E	G	X	T	K	E	I	V	E	Q	I	V	I	C	L	G	Q
Template Known Secondary structure		T	T	S												T	T	B			B		T	T	S	S		G	G	G	S	G	G	G	T	T	S		B	S																			T	T
Template Predicted Secondary structure
Template SS confidence
		296	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions