Job Description P22256 Confidence 99.95% Date Thu Jan 5 11:38:48 GMT 2012 Rank 80 Aligned Residues 333 % Identity 15% Template c3h14A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, classes i and ii; PDBTitle: crystal structure of a putative aminotransferase from silicibacter2 pomeroyi Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	.	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N
Query Conservation																																																																.
Alig confidence																			.	.	.														.	.	.	.	.	.	.	.	.																					.
Template Conservation																			.	.	.														.	.	.	.	.	.	.	.	.
Template Sequence		A	G	R	R	I	I	H	X	E	V	G	Q	P	G	T	G	A	.	.	.	P	R	G	A	V	E	A	L	A	K	S	L	E	.	.	.	.	.	.	.	.	.	G	L	P	A	L	R	Q	R	I	A	R	L	Y	G	E	W	Y	G	V	D	L	D	P	G	R	V	V	I	T	P	G	S	S	G	G	F	L	L
Template Known Secondary structure		T	T									S	S		S	S		S	.	.	.														.	.	.	.	.	.	.	.	.																							G	G	G					S	S
Template Predicted Secondary structure																			.	.	.														.	.	.	.	.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P
Query Conservation
Alig confidence							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template Sequence		A	F	T	A	L	.	.	.	F	D	S	G	D	R	V	G	I	G	A	P	G	Y	P	S	Y	R	Q	I	L	R	A	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	V	P	V	D	L	P	T	A	P	E	N	R	L	Q	P	V	P	A	D	F	A	.	.	.	.	.	.	.	.	.	G
Template Known Secondary structure							.	.	.			T	T								S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										G	G	G	T	T	S							T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure							.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.
Template SS confidence
		107	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.																.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.										.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.		.
Predicted Secondary structure																																																											.																					.
Query SS confidence																																																											.																					.
Query Sequence		E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	.	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	.	P
Query Conservation																																																											.																					.
Alig confidence																		.																																									.																					.
Template Conservation																		.
Template Sequence		L	D	L	A	G	L	X	V	A	S	P	A	N	P	T	G	.	T	X	L	D	H	A	A	X	G	A	L	I	E	A	A	Q	A	Q	G	A	S	F	I	S	D	E	I	Y	H	G	I	E	Y	E	A	K	A	V	T	A	L	E	L	T	D	E	C	Y	V	I	N	S	F	S	K	Y	F	S	X	T	G	W	R
Template Known Secondary structure		S			S						S	S		T	T	T		.																		T	T								T	T	T	T		B	S	S	S					G	G	G	T		S	S	S						S	S	S	T	T			T	T	S
Template Predicted Secondary structure																		.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.
Predicted Secondary structure																																																																														.
Query SS confidence																																																																														.
Query Sequence		L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	.	G	A	M
Query Conservation																																																																														.
Alig confidence																																							.	.	.																																					.
Template Conservation																																							.	.	.
Template Sequence		V	G	W	X	V	V	P	E	D	Q	V	R	V	V	E	R	I	A	Q	N	X	F	I	C	A	P	H	A	S	Q	V	A	A	L	A	A	L	.	.	.	D	C	D	A	E	L	Q	A	N	L	D	V	Y	K	A	N	R	K	L	X	L	E	R	L	P	K	A	G	F	T	R	I	A	P	P	D	G	A	F	Y
Template Known Secondary structure									G	G	G											T	T															T	.	.	.	T																											T				B					B	T	T
Template Predicted Secondary structure																																							.	.	.
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.		.	.	.	.	.	.	390	.	.	.	.						.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																															.												.	.	.	.	.
Query SS confidence																															.												.	.	.	.	.
Query Sequence		I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	.	G	L	I	L	L	S	C	G	P	Y	Y	.	.	.	.	.	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E
Query Conservation																															.												.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.												.												.	.	.	.	.									.	.
Template Conservation													.	.	.	.	.	.	.																																					.	.
Template Sequence		V	Y	A	D	V	S	D	L	T	D	D	.	.	.	.	.	.	.	S	R	A	F	A	A	E	I	L	E	K	A	G	V	A	V	T	P	G	L	D	F	D	P	E	R	G	A	G	T	L	R	F	S	Y	A	.	.	R	A	T	A	D	I	E	E	G	L	D	R	L	E	A	F	X	Q	A
Template Known Secondary structure							T	T	T		S		.	.	.	.	.	.	.																			G	G	G	T		T	T	T	G	G	G								.	.	S
Template Predicted Secondary structure													.	.	.	.	.	.	.																																					.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.								.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.			.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions