Job Description P22256 Confidence 99.95% Date Thu Jan 5 11:38:48 GMT 2012 Rank 86 Aligned Residues 326 % Identity 15% Template c3ftbA_ PDB info PDB header:transferase Chain: A: PDB Molecule:histidinol-phosphate aminotransferase; PDBTitle: the crystal structure of the histidinol-phosphate2 aminotransferase from clostridium acetobutylicum Resolution 2.00 Å

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		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A
Query Conservation
Alig confidence									.	.						.																	.	.	.	.	.																							.																			.	.	.
Template Conservation									.	.						.																	.	.	.	.	.																							.																			.	.	.
Template Sequence		L	L	D	Y	S	S	N	.	.	I	N	P	L	G	.	I	P	K	S	F	L	N	N	I	D	E	G	I	K	N	L	.	.	.	.	.	G	V	Y	P	D	V	N	Y	R	R	L	N	K	S	I	E	N	Y	L	K	L	K	.	D	I	G	I	V	L	G	N	G	A	S	E	I	I	E	L	S	I	.	.	.
Template Known Secondary structure					T	T			.	.			T	T		.	S						T	T							G	G	.	.	.	.	.	G	S				T	T													T			.	S							S	S										.	.	.
Template Predicted Secondary structure									.	.						.																	.	.	.	.	.																							.																			.	.	.
Template SS confidence
		28	.	30	.	.	.	.			.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.						.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A
Query Conservation
Alig confidence		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	S	L	F	E	K	I	L	I	I	V	P	S	Y	A	E	Y	E	I	N	A	K	K	H	G	V	S	V	V	F	S	Y	L	D	E	N	M	C	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	D	I	I	S	K	I	D	D	V	D	.	.	.	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	T	T		S							S			T									T	T										T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T	T		S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.
Template SS confidence
						96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																		.	.	.	.	.	140	.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.				.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.	.	.
Query SS confidence																																																																.	.	.
Query Sequence		I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	.	.	.	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V
Query Conservation																																																																.	.	.
Alig confidence																																																																.	.	.
Template Conservation
Template Sequence		S	V	I	I	G	N	P	N	N	P	N	G	G	L	I	N	K	E	K	F	I	H	V	L	K	L	A	E	E	K	K	K	T	I	I	I	D	E	A	F	I	E	F	T	G	D	P	S	S	S	F	V	G	E	I	K	N	Y	S	C	L	F	I	I	R	A	M	T	K	F	F	A	M	P	G	I	R	F	G	Y
Template Known Secondary structure							T	T	B	T	T	T	T	B																		T								S	S	G	G	G	T			T	T	S	S	S	G	G	G	T	T	T		S	S							S	S	S	T	T	S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.		.	.	.	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	.	M	I	A	I	E
Query Conservation																																																																												.
Alig confidence																																		.	.	.																																								.
Template Conservation																																		.	.	.
Template Sequence		G	I	T	N	N	K	E	I	A	A	K	I	K	A	K	Q	N	P	W	N	I	N	C	F	A	E	M	A	A	I	N	C	.	.	.	L	K	D	T	N	Y	I	E	E	S	L	L	W	I	K	K	E	R	K	R	F	I	E	E	L	N	K	I	G	F	I	K	R	V	F	S	P	H	A	N	F	V	L	C	R
Template Known Secondary structure					S										T	T	S		T	T		S											T	.	.	.	S	S																										S	S	S								S	S	S
Template Predicted Secondary structure																																		.	.	.
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.				.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.					.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																																					.	.	.	.
Query SS confidence																																					.	.	.	.
Query Sequence		L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	.	.	.	.	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E	A
Query Conservation																																					.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.																					.	.	.	.										.	.	.
Template Conservation								.	.	.	.	.	.	.	.	.																																		.	.	.
Template Sequence		L	E	N	I	S	G	.	.	.	.	.	.	.	.	.	E	K	L	Y	D	S	L	L	K	E	D	I	V	I	R	R	C	C	N	F	I	G	L	D	D	S	F	V	R	F	A	I	K	.	.	.	D	E	K	K	N	T	K	F	L	R	A	L	K	G	V	E	N	N	L
Template Known Secondary structure			S	S	S			.	.	.	.	.	.	.	.	.									T	T	T							T	T	S	T	T			T	T								.	.	.																		T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.																																		.	.	.
Template SS confidence
		304	.	.	.	.	.										310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.				.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions