Job Description P22256 Confidence 99.90% Date Thu Jan 5 11:38:48 GMT 2012 Rank 160 Aligned Residues 324 % Identity 14% Template c3frkB_ PDB info PDB header:transferase Chain: B: PDB Molecule:qdtb; PDBTitle: x-ray structure of qdtb from t. thermosaccharolyticum in2 complex with a plp:tdp-3-aminoquinovose aldimine Resolution 2.15 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V
Query Conservation
Alig confidence																.	.	.	.	.																					.	.	.	.	.																.	.	.
Template Conservation																.	.	.	.	.																					.	.	.	.	.																.	.	.
Template Sequence		K	I	S	F	A	S	F	K	P	M	H	D	E	I	.	.	.	.	.	E	Y	E	I	K	F	K	F	E	E	I	Y	K	R	N	W	F	I	L	G	.	.	.	.	.	D	E	D	K	K	F	E	Q	E	F	A	D	Y	C	N	.	.	.	V	N	Y	C	I	G	C	G	N	G	L	D	A	L	H	L	I	L
Template Known Secondary structure			B		S											.	.	.	.	.															T			S	S		.	.	.	.	.														T	T	.	.	.	S	S						S
Template Predicted Secondary structure																.	.	.	.	.																					.	.	.	.	.																.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.						.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.						.	.	.	.	40	.	.	.	.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D
Query Conservation
Alig confidence					.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation					.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	G	Y	.	.	D	I	G	F	G	D	E	V	I	V	P	S	N	T	F	I	A	T	A	L	A	V	S	Y	T	G	A	K	P	I	F	V	E	P	D	I	R	T	Y	N	I	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	L	I	E	S	A	I
Template Known Secondary structure				T	.	.	T			T	T							T	T	S											T	T										T	T	T	T				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	T	G	G	G
Template Predicted Secondary structure					.	.																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		69	70	.			.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.																										.	.	.	.	.	.	120	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		T	E	K	T	K	A	I	I	A	V	H	L	Y	G	Q	P	A	D	.	.	.	.	M	D	E	I	K	R	I	A	K	K	Y	N	L	K	L	I	E	D	A	A	Q	A	H	G	S	L	Y	K	G	M	K	V	G	S	L	G	D	A	A	G	F	S	F	Y	P	A	K	N	L	G	S	L	G	D	G	G	A	V
Template Known Secondary structure			T	T									G	G	G	S				.	.	.	.											T	T								T	T		T	T				T	T			T	T	S	S	S	S								T	T	S	T	T			S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.					140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.														.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.
Template Sequence		V	T	N	D	K	D	L	A	E	K	I	K	A	L	S	N	Y	G	S	E	K	K	Y	H	H	I	Y	K	G	F	N	S	R	L	D	E	L	Q	A	G	F	L	R	V	K	L	K	.	.	.	.	.	.	Y	L	D	K	W	N	E	E	R	R	K	I	A	Q	K	Y	I	A	G	I	N	N	P	N	V	I	I
Template Known Secondary structure				S													B	T	T		S	B	T	T	B			S				B																	.	.	.	.	.	.																						B	T	T	B	B
Template Predicted Secondary structure																																																	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.							.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																										.	.	.	.	.	.	400	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	V	L	R	I	L	V
Query Conservation																																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		P	V	E	A	D	Y	A	K	H	V	W	Y	T	F	V	I	R	S	E	K	.	.	.	.	.	.	R	D	E	L	Q	K	Y	L	N	N	N	G	I	G	T	L	I	H	Y	P	I	P	I	H	L	Q	Q	A	Y	K	D	L	G	F	K	T	G	N	F	P	I	A	E	K	I	A	N	E	I	L	S	I	P	I
Template Known Secondary structure						T	T						S							T	T	.	.	.	.	.	.											T	T	B			B		S		S	S		G	G	G	S	G	G	G	G	G	G				T	T	S	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.							.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		W	Y	G	M	K	N	E	E	I	E	Y	V	I	D	K	I	N	A
Template Known Secondary structure			T	T
Template Predicted Secondary structure
Template SS confidence
		346	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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