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Job DescriptionP22256
Confidence99.96%DateThu Jan 5 11:38:48 GMT 2012
Rank71Aligned Residues338
% Identity15%Templatec3f9tB_
PDB info PDB header:lyaseChain: B: PDB Molecule:l-tyrosine decarboxylase mfna; PDBTitle: crystal structure of l-tyrosine decarboxylase mfna (ec 4.1.1.25)2 (np_247014.1) from methanococcus jannaschii at 2.11 a resolution
Resolution2.11 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.... .....90.........100.........110.........120........
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Query Sequence  NTGHLHPKVVAAVEAQLKKLSHTCFQVLAYE. . . . . PYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKR
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Template Sequence  IFGSXCSNVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLNNK. DAYGHIVSGGTEANLXALRCIKNIWRE
Template Known Secondary structure  B
S
S




TTT

TTSGGG
TT
T.T
S
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   33......40.........50.........60.........70.........80.... .....90.........100.........110.
 
   129130.........140.........150.........160.........170.........180.........190.........200........
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Query Sequence  SGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPV
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Template Sequence  KRRKGLSKNEHPKI. . . . . IVPITAHFSFEKGREXXDLEYIYAPIKEDYTI. . . DEKFVKDAVED. . . . YDVDGIIGIAG
Template Known Secondary structure  TT



SS
.....TT

TT

B
TTSSB...
....S


BS
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   112.......120..... ....130.........140.........150....... ..160........ .170.........
 
   209210.........220.........230.........240.........250.... .....260.........270........
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Query Sequence  QGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAM. . . . . . . . . . EQMGVAPDLTTFAKSIAGGFPLAG
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Template Sequence  TTELGTIDN. . . . IEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKFDFSLGVDSITIDPHKXGHCPIPSGG
Template Known Secondary structure 
TTT

B

....T

TTGGGTGGG

GGG

TT




SGGGT
S

TTTTT


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   180........ .190.........200.........210.........220.........230.........240.........250.....
 
   279280.........290.... .....300.........310.........320.........330.........340.........350
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Query Sequence  VTGRAEVMDAVAPGGL. . . . . . . . GGTYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRG
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Template Sequence  ILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLGREGQRKIVNECXENTLYLYKKLKENNFKPVIEP
Template Known Secondary structure  SSGGGGGGT

TTSSSS
SS
SS

STT

BSS

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   256...260.........270.........280.........290.........300.........310.........320.........330.....
 
   351........360.........370.........380.........390.........400.........410.........420
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Query Sequence  LGAMIAIELFEDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC
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Template Sequence  ILNIVAIEDED. . . . . . . . . . . YKEVCKKLRDRGIYVSV. CNCVKALRIVVXPHIKREHIDNFIEILNSI
Template Known Secondary structure  SSS
TT...........TT
B
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SSSS

TT

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   336...340...... ...350.........360... ......370.........380.........390...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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