Job Description P22256 Confidence 99.90% Date Thu Jan 5 11:38:48 GMT 2012 Rank 164 Aligned Residues 332 % Identity 10% Template c3f0hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase; PDBTitle: crystal structure of aminotransferase (rer070207000802) from2 eubacterium rectale at 1.70 a resolution Resolution 1.70 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	.	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T
Query Conservation																																																									.
Alig confidence																																																									.																.	.
Template Conservation																																																																									.	.
Template Sequence		L	N	F	T	V	G	P	V	X	S	S	E	E	V	R	A	I	G	A	E	Q	V	P	Y	F	R	T	T	E	F	S	S	T	X	L	E	N	E	K	F	X	L	E	Y	A	K	A	P	E	G	S	K	A	V	F	X	T	C	S	S	T	G	S	X	E	A	V	V	X	N	C	.	.	F	T	K	K	D	K	V
Template Known Secondary structure					S	S	S	S												T	S						S	S																			T			T	T							S	S														.	.			T	T
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.			.	.	.	.	.	.	.
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.											.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.											.	.	.	.	.
Template Sequence		L	V	I	D	G	G	S	F	G	H	R	F	V	Q	L	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	H	E	I	P	Y	V	A	L	K	L	E	H	G	K	K	L	.	.	.	T	K	E	K	L	Y	E	Y	D	N	.	.	.	.	.	Q	N	F	T	G	L	L	V	N	V	D	E	T	S
Template Known Secondary structure						S	S											.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T										T	T				.	.	.							T	T	T	T	.	.	.	.	.	S									S			T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.											.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.															.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P
Query Conservation
Alig confidence								.	.	.	.																														.	.	.	.
Template Conservation								.	.	.	.																														.	.	.	.
Template Sequence		T	A	V	L	Y	D	.	.	.	.	T	X	X	I	G	E	F	C	K	K	N	N	X	F	F	V	C	D	C	V	S	A	F	L	A	D	P	F	N	.	.	.	.	X	N	E	C	G	A	D	V	X	I	T	G	S	Q	V	L	A	C	P	P	G	I	S	V	I	V	L	A	P	R	G	V	E	R	V	E	K
Template Known Secondary structure		T	T					.	.	.	.											T	T								T	T	T	T	T	T	S				.	.	.	.					T		S													S	S																T
Template Predicted Secondary structure								.	.	.	.																														.	.	.	.
Template SS confidence
		138	.	140	.	.	.					.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		292	.	.	.	.	.	.																		.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	G	G	T	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	V	R	T	X	Y	F	D	L	K	D	A	L	K	N	Q	E	R	G	Q	T	P	F	T	P	A	V	G	I	L	L	Q	I	N	E	R	L	K	E	I	K	K	H	G	G	A	D	A	E	V	A	R	I	A	S	Q	A	A	D	F	R	A	K	I	K	D	L	P	F	E	L	V	S	E	S	P	A	N	G
Template Known Secondary structure							S	T	T										T	T	T			S	S																				T	T																				T	T	T	S	S						S	S	B	B	T	T
Template Predicted Secondary structure
Template SS confidence
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.			.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure																																							.	.
Query SS confidence																																							.	.
Query Sequence		I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	.	.	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E
Query Conservation																																							.	.
Alig confidence														.	.	.	.	.	.	.																			.	.
Template Conservation														.	.	.	.	.	.	.
Template Sequence		V	T	S	V	H	P	T	T	A	N	A	Y	.	.	.	.	.	.	.	D	I	F	L	K	L	K	D	E	Y	G	I	W	I	C	P	N	G	G	E	X	K	D	T	I	F	R	V	G	H	I	G	A	L	T	H	E	D	N	T	T	L	V	N	A	F	K	D	L	Q	K	R
Template Known Secondary structure								S	S	S				.	.	.	.	.	.	.										S	S								G	G	G	T	T	T								S	S																			T
Template Predicted Secondary structure														.	.	.	.	.	.	.
Template SS confidence
		291	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions