Phyre 2 alignment of P22256 with c3eucB

Job Description P22256
Confidence 99.92% Date Thu Jan 5 11:38:48 GMT 2012

Rank 127 Aligned Residues 325

% Identity 15% Template c3eucB_

PDB info PDB header:transferase Chain: B: PDB Molecule:histidinol-phosphate aminotransferase 2; PDBTitle: crystal structure of histidinol-phosphate aminotransferase2 (yp_297314.1) from ralstonia eutropha jmp134 at 2.05 a resolution

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N
Query Conservation
Alig confidence													.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.
Template Sequence	P	D	S	H	G	L	V	K	L	D	A	X	.	.	E	N	Y	R	L	.	.	P	P	A	L	R	S	E	L	A	A	R	L	G	E	V	S	S	.	.	.	.	.	.	.	.	.	.	.	E	A	L	R	A	K	L	K	E	V	X	Q	V	P	A	G	X	E	V	L	L	G	N	G	S	D	E	I	I	S	X
Template Known Secondary structure				T	T	S				S	S	S	.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.												T			T	T
Template Predicted Secondary structure													.	.						.	.																		.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
	26	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.			.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.												60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90

	118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P
Query Conservation
Alig confidence					.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Conservation					.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template Sequence	L	A	L	A	.	.	.	A	A	R	P	G	A	K	V	X	A	P	V	P	G	F	V	X	Y	A	X	S	A	Q	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	E	F	V	G	V	P	L	R	A	D	F	T	L	D	R	G	A	X	L	A	A	X	A	E	H	.	.	.	.
Template Known Secondary structure					.	.	.	T			T	T								S												T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T																.	.	.	.
Template Predicted Secondary structure					.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.
Template SS confidence
	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.																		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

	198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.			.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																				.	.
Query SS confidence																																				.	.
Query Sequence	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	.	.	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P
Query Conservation																																				.	.
Alig confidence	.																.																			.	.
Template Conservation	.																.
Template Sequence	.	Q	P	A	I	V	Y	L	A	Y	P	N	N	P	T	G	.	N	L	F	D	A	A	D	X	E	A	I	V	R	A	A	Q	G	S	V	C	R	S	L	V	V	V	D	E	A	Y	Q	P	F	A	Q	E	S	W	X	S	R	L	T	D	F	G	N	L	L	V	X	R	T	V	S	K	L	G	L	A	G	I	R
Template Known Secondary structure	.			S						S	S		T	T	T		.															T	B	T	T	S		B								T	T			S	S	S			S	G	G	G	G	G	T		T	T										T	T		S	S
Template Predicted Secondary structure	.																.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170		.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.

	276	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I
Query Conservation
Alig confidence																			.	.																		.	.	.
Template Conservation																			.	.																		.	.	.
Template Sequence	L	G	Y	V	A	G	D	P	Q	W	L	E	Q	L	D	K	V	R	.	.	P	P	Y	N	V	N	V	L	T	E	A	T	A	L	F	A	L	.	.	.	E	H	V	A	V	L	D	E	Q	A	A	Q	L	R	A	E	R	S	R	V	A	E	G	X	A	A	H	G	G	V	T	V	F	P	S	A	A	N	F	L
Template Known Secondary structure															G	G	G	S	.	.		T	T		S													.	.	.	T																									T	S	T	T							S	S	S
Template Predicted Secondary structure																			.	.																		.	.	.
Template SS confidence
	234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.				.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.

	356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390					.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																				.	.	.	.
Query SS confidence																																				.	.	.	.
Query Sequence	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	.	.	.	.	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D
Query Conservation																																				.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.													.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template Sequence	L	A	R	V	P	D	.	.	.	.	.	.	.	.	.	.	.	A	A	Q	T	F	D	R	L	L	A	R	K	V	L	I	K	N	V	S	K	X	H	P	L	L	A	N	C	L	R	V	T	V	S	.	.	.	T	P	E	E	N	A	Q	F	L	E	A	F	A	A	S	L	Q
Template Known Secondary structure					S		.	.	.	.	.	.	.	.	.	.	.											T	T							T	T	S		G	G	G	T	T								.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
	309	310	.	.	.	.												.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.				.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys
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