Job Description P22256 Confidence 99.81% Date Thu Jan 5 11:38:48 GMT 2012 Rank 214 Aligned Residues 292 % Identity 16% Template c3e6gA_ PDB info PDB header:lyase Chain: A: PDB Molecule:cystathionine gamma-lyase-like protein; PDBTitle: crystal structure of xometc, a cystathionine c-lyase-like2 protein from xanthomonas oryzae pv.oryzae Resolution 2.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N
Query Conservation
Alig confidence																											.	.	.																			.	.	.	.
Template Conservation																											.	.	.																			.	.	.	.
Template Sequence		S	T	Y	A	Q	S	S	T	H	N	P	T	R	F	A	Y	E	R	C	V	A	A	L	E	G	.	.	.	G	T	R	A	F	A	F	A	S	G	M	A	A	T	S	T	V	M	.	.	.	.	E	L	L	D	A	G	S	H	V	V	A	M	D	D	L	Y	G	G	T	F	R	L	F	E	R	V	R	R	R	T
Template Known Secondary structure		S																								T	.	.	.		S						S	S										.	.	.	.	T	T	S		T	T							S	S
Template Predicted Secondary structure																											.	.	.																			.	.	.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.
Template Sequence		A	G	L	D	F	S	F	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	T	D	P	A	A	F	K	A	A	I	R	.	.	.	.	.	A	D	T	K	M	V	W	I	E	T	P	T	N	P	M	L	K	L	V	D	.	.	.	.	I	A	A	I	A	V	I	A	R	K	H	G
Template Known Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		T	T											.	.	.	.	.	T	T								S	S		T	T	T						.	.	.	.											T	T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.																					.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.																			.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.
Query SS confidence																																											.	.	.	.
Query Sequence		I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	.	.	.	.	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L
Query Conservation																																											.	.	.	.
Alig confidence												.	.	.	.																												.	.	.	.
Template Conservation												.	.	.	.
Template Sequence		L	L	T	V	V	D	N	T	F	A	.	.	.	.	S	P	M	L	Q	R	P	L	S	L	G	A	D	L	V	V	H	S	A	T	K	Y	L	N	G	H	S	D	M	V	G	G	I	A	V	V	G	D	N	A	E	L	A	E	Q	M	A	F	L	Q	N	S	I	G	G	V	Q	G	P	F	D	S	F	L	A	L
Template Known Secondary structure									S	S	S	.	.	.	.		T	T	T			G	G	G	G	T		S						T	T	T	T	T	T		S	S	S										S																		B
Template Predicted Secondary structure												.	.	.	.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350																			.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Template Sequence		R	G	L	K	.	.	.	.	.	.	T	L	P	L	R	M	R	A	H	C	E	N	A	L	A	L	A	Q	W	L	E	T	H	P	A	I	E	K	V	I	Y	P	G	L	A	S	H	P	Q	H	V	L	A	K	R	Q	M	S	G	F	G	G	I	V	S	I	V	L	K	G	.	.	.	.	.	.	.	G	F	D
Template Known Secondary structure					T	.	.	.	.	.	.	T																					T		T	T							T	T	S	T	T	S	T	T									S	S			S							T	T	.	.	.	.	.	.	.
Template Predicted Secondary structure						.	.	.	.	.	.																																																													.	.	.	.	.	.	.
Template SS confidence
		256	.	.	.							260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.								320	.	.
		372	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.																										.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		A	A	K	R	F	C	E	K	T	E	L	F	T	L	A	E	S	L	G	G	V	E	S	L	V	N	H	P	A	V	M	T	H	A	S	I	P	V	A	R	R	E	Q	L	G	I	S	D	A	L	V	R	L	S	V	G	I	.	.	.	.	E	D	L	G	D	L	R	G	D	L	E	R	A
Template Known Secondary structure											S	S	S				S					S	S						T	T	T	T	T	T		S	S			T	T	T	T	T	S	S			S	S								S	.	.	.	.	S										T	T
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		323	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.					380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions