Job Description P22256 Confidence 99.95% Date Thu Jan 5 11:38:48 GMT 2012 Rank 83 Aligned Residues 349 % Identity 16% Template c3cbfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:alpha-aminodipate aminotransferase; PDBTitle: crystal structure of lysn, alpha-aminoadipate2 aminotransferase, from thermus thermophilus hb27 Resolution 1.67 Å

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		39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A
Query Conservation
Alig confidence																			.																																													.
Template Conservation																			.																																													.
Template Sequence		Q	R	P	G	I	L	S	F	A	G	G	L	P	A	P	E	L	.	F	P	K	E	E	A	A	E	A	A	A	R	I	L	R	E	K	G	E	V	A	L	Q	Y	S	P	T	E	G	Y	A	P	L	R	A	F	V	A	E	W	I	G	V	R	.	P	E	E	V	L	I	T	T	G	S	Q	Q	A	L	D	L	V
Template Known Secondary structure		T	S	T	T					S	S					G	G	G	.	S																					T	S				T	T														T	S		.	G	G	G					S	S
Template Predicted Secondary structure																			.																																													.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.		.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
		119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E
Query Conservation
Alig confidence						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Sequence		G	K	V	F	.	.	.	L	D	E	G	S	P	V	L	L	E	A	P	S	Y	M	G	A	I	Q	A	F	R	L	Q	G	P	R	F	L	T	V	P	A	G	E	E	G	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	D	A	L	E	E	V	L	K	R	.	.	.	.	E
Template Known Secondary structure						.	.	.			T	T								S											T	T											T	T			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Predicted Secondary structure						.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template SS confidence
		108	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.																				150	.	.	.	.	.	.	.	.	.	160					.
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.								.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure																																																									.	.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.	.	.
Query Sequence		D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	.	.	.	.	.	.	.	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A
Query Conservation																																																									.	.	.	.	.	.	.
Alig confidence																																																									.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	P	R	F	L	Y	L	I	P	S	F	Q	N	P	T	G	G	L	T	P	L	P	A	R	K	R	L	L	Q	M	V	M	E	R	G	L	V	V	V	E	D	D	A	Y	R	E	L	Y	F	G	E	A	R	L	P	S	L	F	E	L	A	R	E	A	G	Y	P	G	V	I	Y	L	G	S	F	S	K	V	L	S
Template Known Secondary structure				S							B	S		T	T	T			B																	T								T	T	T	T		B		S	S														T										S	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	G	L	R	V	A	F	A	V	A	H	P	E	A	L	Q	K	L	V	Q	A	K	Q	G	A	D	L	H	T	P	M	L	N	Q	M	L	V	H	E	L	L	K	E	G	F	S	E	R	L	E	R	V	R	R	V	Y	R	E	K	A	Q	A	M	L	H	A	L	D	R	E	V	P	K	E	V	R	Y	T	R	P
Template Known Secondary structure		S	T	T																								S	S														T	T	T																											S		T	T	S
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
				352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390							.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.
Predicted Secondary structure		.	.																																								.	.	.	.	.	.
Query SS confidence		.	.																																								.	.	.	.	.	.
Query Sequence		.	.	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	.	.	.	.	.	.	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E
Query Conservation		.	.																																								.	.	.	.	.	.
Alig confidence		.	.														.	.	.	.	.	.	.	.																			.	.	.	.	.	.													.
Template Conservation																	.	.	.	.	.	.	.	.																																					.
Template Sequence		K	G	G	M	F	V	W	M	E	L	P	K	G	L	S	.	.	.	.	.	.	.	.	A	E	G	L	F	R	R	A	L	E	E	N	V	A	F	V	P	G	G	P	F	F	A	N	G	G	G	E	N	T	L	R	L	S	Y	A	.	T	L	D	R	E	G	I	A	E	G	V	R	R	L	G	R	A	L	K	G
Template Known Secondary structure		S	B	S	S								T	T			.	.	.	.	.	.	.	.											T	T						S	G	G	G		T	T	S			T	T							S	.	S	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																																					.
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.									.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.		.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
		424
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		393

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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