Job Description P22256 Confidence 99.89% Date Thu Jan 5 11:38:48 GMT 2012 Rank 175 Aligned Residues 331 % Identity 16% Template c2yrrA_ PDB info PDB header:transferase Chain: A: PDB Molecule:aminotransferase, class v; PDBTitle: hypothetical alanine aminotransferase (tth0173) from thermus2 thermophilus hb8 Resolution 1.86 Å

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		52	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	.	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G
Query Conservation																																																			.
Alig confidence																																																			.																						.	.	.
Template Conservation																																																																									.	.	.
Template Sequence		M	L	L	L	T	P	G	P	T	P	I	P	E	R	V	Q	K	A	L	L	R	P	M	R	G	H	L	D	P	E	V	L	R	V	N	R	A	I	Q	E	R	L	A	A	L	F	D	P	G	E	G	A	L	V	A	A	L	A	G	S	G	S	L	G	M	E	A	G	L	A	N	.	.	.	L	D	R	G	P	V
Template Known Secondary structure						S	S	S	S									G	G	G	G	S					T	T																							T	T							S	S												T	.	.	.		S
Template Predicted Secondary structure																																																																									.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.
		131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.												.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.												.	.	.	.
Template Sequence		L	V	L	V	N	G	A	F	S	Q	R	V	A	E	M	A	A	L	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	L	D	P	E	V	L	D	F	P	P	G	E	P	V	.	.	.	D	P	E	A	V	A	R	A	L	K	R	.	.	.	.	R	R	Y	R	M	V	A	L	V	H	G	E	T
Template Known Secondary structure							S													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T										T	T	S			.	.	.												.	.	.	.	S			S						S			T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.												.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.					.	.	.	.	.	.	.	130	.	.	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	.
Query Conservation																																																																																	.
Alig confidence									.	.	.	.																							.	.	.																																												.
Template Conservation									.	.	.	.																							.	.	.
Template Sequence		S	T	G	V	L	N	P	.	.	.	.	A	E	A	I	G	A	L	A	K	E	A	G	A	L	F	F	L	D	A	V	T	T	.	.	.	L	G	M	L	P	F	S	M	R	A	M	G	V	D	Y	A	F	T	G	S	Q	K	C	L	S	A	P	P	G	L	A	P	I	A	A	S	L	E	A	R	K	A	F	T
Template Known Secondary structure		T	T	T					.	.	.	.												T								T	T	T	.	.	.	T	T	T	S								T		S						T	T	S	T	T				S	S
Template Predicted Secondary structure									.	.	.	.																							.	.	.
Template SS confidence
		136	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
															290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.			.	.	.	.	.	.	350	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	.	.	E	I	G	D	V	R	G	L	G	A	M
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																																																							.	.
Template Conservation
Template Sequence		G	K	R	G	W	Y	L	D	L	A	R	V	A	E	H	W	E	R	G	G	Y	H	H	T	T	P	V	L	L	H	Y	A	L	L	E	A	L	D	L	V	L	E	E	G	V	A	A	R	E	R	R	A	R	E	V	Y	A	W	V	L	E	E	L	K	A	R	G	F	R	P	Y	P	K	A	S	P	L	P	T	V
Template Known Secondary structure				S		S	T	T										T	T				S	S																																											T	T				S		S	S	S	B		T	T
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		355	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390			.	.	.	.	.	.	.	.	.	400	.		.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure																																						.	.												.
Query SS confidence																																						.	.												.
Query Sequence		I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	.	.	G	P	Y	Y	N	V	L	R	I	L	V	.	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D
Query Conservation																																						.	.												.
Alig confidence												.	.	.	.	.	.	.	.																			.	.												.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		L	V	V	R	P	P	E	G	V	D	.	.	.	.	.	.	.	.	A	D	R	L	V	R	A	L	Y	A	E	G	V	A	V	A	G	G	I	G	P	T	R	G	Q	V	L	R	L	G	L	M	G	E	G	A	R	R	E	A	Y	Q	A	F	L	K	A	L	D	R	A	L	A
Template Known Secondary structure								T	T			.	.	.	.	.	.	.	.											T	T								G	G	G	T	T	T							S	G	G	G	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		289	290	.	.	.	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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