Job Description P22256 Confidence 100.00% Date Thu Jan 5 11:38:48 GMT 2012 Rank 36 Aligned Residues 375 % Identity 17% Template c2w8wA_ PDB info PDB header:transferase Chain: A: PDB Molecule:serine palmitoyltransferase; PDBTitle: n100y spt with plp-ser Resolution 2.14 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.																								.	.	.	.
Query SS confidence																																																						.																								.	.	.	.
Query Sequence		K	E	L	M	Q	R	R	S	Q	A	I	P	R	G	V	G	Q	I	H	P	I	F	A	D	R	A	E	N	C	R	V	W	D	V	E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	.	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	.	.	.	.
Query Conservation																																																						.																								.	.	.	.
Alig confidence																																															.	.	.					.																								.	.	.	.
Template Conservation																																															.	.	.
Template Sequence		D	G	L	I	A	E	R	Q	K	L	L	D	S	G	V	T	D	P	F	A	I	V	M	E	Q	V	K	S	P	T	E	A	V	I	R	G	K	D	T	I	L	L	G	T	Y	.	.	.	N	Y	M	G	M	T	F	D	P	D	V	I	A	A	G	K	E	A	L	E	K	F	G	S	G	T	Y	G	S	R	M	L
Template Known Secondary structure														T	T				G	G	G				S				S	S	S					T	T							S			.	.	.		T	T		G	G	G																	S				S	B	T	T	T
Template Predicted Secondary structure																																															.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	A	Y	E	P	Y	L	E	L	C	E	I	M	N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M
Query Conservation
Alig confidence																					.	.	.																						.	.	.																															.	.	.	.
Template Conservation																					.	.	.																						.	.	.																															.	.	.	.
Template Sequence		N	G	T	F	H	D	H	M	E	V	E	Q	A	L	R	D	F	Y	G	.	.	.	T	T	G	A	I	V	F	S	T	G	Y	M	A	N	L	G	I	I	S	T	L	.	.	.	A	G	K	G	E	Y	V	I	L	D	A	D	S	H	A	S	I	Y	D	G	C	Q	Q	G	N	A	E	I	V	R	.	.	.	.
Template Known Secondary structure		T	T																	T	.	.	.		S						S														.	.	.	S		T	T							T	T												S		S					.	.	.	.
Template Predicted Secondary structure																					.	.	.																						.	.	.																															.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.				.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.				.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	M	P	G	H	V	Y	R	A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																								.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	R	H	N	S	V	E	D	L	D	K	R	L	G	R	.	L	P	K	E	P	A	K	L	V	V	L	E	G	V	Y	S	M	L	G	D	I	A	P	.	.	.	.	L	K	E	M	V	A	V	A	K	K	H	G	A	M	V	L	V	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T												.	S		S	S	S								S			T	T	T	T					.	.	.	.											T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.																								.	.	.	.
Template SS confidence
																					176	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.					.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		240	.	.	.		.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure						.																	.	.
Query SS confidence						.																	.	.
Query Sequence		E	V	Q	S	.	G	A	G	R	T	G	T	L	F	A	M	E	Q	M	G	V	.	.	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E
Query Conservation						.																	.	.
Alig confidence						.																	.	.
Template Conservation
Template Sequence		E	A	H	S	M	G	F	F	G	P	N	G	R	G	V	Y	E	A	Q	G	L	E	G	Q	I	D	F	V	V	G	T	F	S	K	S	V	G	T	V	G	G	F	V	V	S	N	H	P	K	F	E	A	V	R	L	A	C	R	P	Y	I	F	T	A	S	L	P	P	S	V	V	A	T	A	T	T	S	I	R	K
Template Known Secondary structure			T	T	T	T	T	T	S	S	T	T	S							T	T		T	T	T		S						S	T	T	T	T		S	S									T	T	G	G	G										T	S	B
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																																																														.	.	.	.
Query SS confidence																																																																														.	.	.	.
Query Sequence		Q	E	N	L	L	Q	K	A	N	D	L	G	Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	.	.	.	.
Query Conservation																																																																														.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.																										.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.	.
Template Sequence		L	M	T	A	H	E	K	R	E	R	L	W	S	N	A	R	A	L	H	G	G	L	K	A	M	G	F	R	L	G	T	E	T	C	D	S	A	I	V	A	V	M	L	.	.	.	.	.	.	.	.	E	D	Q	E	Q	A	A	M	M	W	Q	A	L	L	D	G	G	L	Y	V	N	M	A	R	P	P	A	T	P
Template Known Secondary structure			T	T																						T	T				S		S	S			S	S							.	.	.	.	.	.	.	.	S	S														T	T								T	T	T	S
Template Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.									.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
			393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A	Q	I	R	Q	G	L	E	I	I	S	Q	C	F	D	E	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	G	T	F	L	L	R	C	S	I	C	A	E	H	T	P	A	Q	I	Q	T	V	L	G	M	F	Q	A	A	G	R	A	V
Template Known Secondary structure		T	T										T	T
Template Predicted Secondary structure
Template SS confidence
		384	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.

No model constructed - rank, confidence too low