Return to main results Retrieve Phyre Job Id

Job DescriptionP22256
Confidence99.90%DateThu Jan 5 11:38:48 GMT 2012
Rank165Aligned Residues334
% Identity13%Templatec2huuA_
PDB info PDB header:transferaseChain: A: PDB Molecule:alanine glyoxylate aminotransferase; PDBTitle: crystal structure of aedes aegypti alanine glyoxylate2 aminotransferase in complex with alanine
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   54.....60.........70.........80.........90.........100.........110.........120.........130...
Predicted Secondary structure 






























Query SS confidence 















































































Query Sequence  NTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIA
Query Conservation   


  
 
 

                        

 
           
    




   

  
     
  

 
Alig confidence 




































































...







Template Conservation      

      
  
                    
  

          
  
 
 
 

      
...   

 

Template Sequence  LMGPGPSNAPQRVLDAMSRPILGHLHPETLKIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNL. . . LEDGDVIL
Template Known Secondary structure 
SSS




TTS



TTST


SSS
...

TT
Template Predicted Secondary structure 























...



Template SS confidence 















































































   22.......30.........40.........50.........60.........70.........80.........90 ........
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
Predicted Secondary structure 















































Query SS confidence 















































































Query Sequence  FSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGG
Query Conservation       

                                          
   
   
           



      
Alig confidence 
































................











....














Template Conservation 
                               
................
   

  
   ....               
Template Sequence  IGHTGHWGDRSADMATRYGADVRVVKSKVGQSL. . . . . . . . . . . . . . . . SLDEIRDALLIH. . . . KPSVLFLTQGDSSTG
Template Known Secondary structure  SSTT


TT


................
....

SSTTTT
Template Predicted Secondary structure 














................

....






Template SS confidence 















































































   99100.........110.........120.........130. ........140... ......150........
 
   214.....220.........230.........240.........250.........260.........270.........280.........290...
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  FYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGG
Query Conservation          
  
  
    
  

 


  
    
        
   

 
  
        
                
Alig confidence 



....




























....






































Template Conservation      ....              
  
           ....                    
 
                
Template Sequence  VLQG. . . . LEGVGALCHQHNCLLIVDTVASLGGAPMF. . . . MDRWEIDAMYTGSQVLGAPPGITPVSFSHRAVERYKRRN
Template Known Secondary structure 

....
TTTT

TTTBTTB


....TTTTT
S








SS

T
S
Template Predicted Secondary structure  ....













....
























Template SS confidence 















































































   159160.. .......170.........180.........190. ........200.........210.........220.........230
 
   294.. ...300.........310.........320.........330.........340... .....
Predicted Secondary structure 


......................








...


Query SS confidence 


. . . . . . . . . . . . . . . . . . . . . .














































. . .




Query Sequence  LGG. . . . . . . . . . . . . . . . . . . . . . TYAGNPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHP. . . EIGDV
Query Conservation     ......................
        
   
                           
     ...    
Alig confidence 


......................














































...




Template Conservation                                          
                              
        
Template Sequence  TKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRGLQDAGFELYADPK
Template Known Secondary structure  S

S
GGG
TT
SSS



S




TT

BSS
GG
Template Predicted Secondary structure 
































Template SS confidence 















































































   232.......240.........250.........260.........270.........280.........290.........300.........310.
 
   349350.........360.........370.........380... ......390 .........400 .........410.........420....
Predicted Secondary structure 














.
..




.





Query SS confidence 


































.






. .









.























Query Sequence  RGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDK. GLILLSC. . GPYYNVLRIL. VPLTIEDAQIRQGLEIISQCFDEA
Query Conservation 

 
                       
   
   .

 
   ..      

  .     
 
 

     
   
   
Alig confidence 















........










.






..









.























Template Conservation                  ........       
     
 
  
        



      
 


      
 
 
   
Template Sequence  DRLSTVTTIKVPQGVD. . . . . . . . WLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDRVLQVFQEAVAAV
Template Known Secondary structure  GB
TT

TT

........

B


GGGTTT

GGG
S
Template Predicted Secondary structure 








........

















Template SS confidence 















































































   312.......320....... ..330.........340.........350.........360.........370.........380...
 
   425.
Predicted Secondary structure 
Query SS confidence 

Query Sequence  KQ
Query Conservation    
Alig confidence 

Template Conservation 
 
Template Sequence  KP
Template Known Secondary structure 

Template Predicted Secondary structure 

Template SS confidence 

   384.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions