Job Description P22256 Confidence 100.00% Date Thu Jan 5 11:38:48 GMT 2012 Rank 35 Aligned Residues 369 % Identity 34% Template c2eh6A_ PDB info PDB header:transferase Chain: A: PDB Molecule:acetylornithine aminotransferase; PDBTitle: crystal structure of acetylornithine aminotransferase from aquifex2 aeolicus vf5 Resolution 1.90 Å

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	P	R	G	V	G	Q	I	H	P	I	F	A	D	R	A	E	N	C	R	V	W	D	V	E	G	R	E	Y	L	D	F	A	G	G	I	A	V	L	N	T	G	H	L	H	P	K	V	V	A	A	V	E	A	Q	L	K	K	L	S	H	T	C	F	Q	V	L	A	Y	E	P	Y	L	E	L	C	E	I	M
Query Conservation
Alig confidence										.																																																										.
Template Conservation										.																																																										.
Template Sequence		Y	L	M	N	N	Y	A	R	.	L	P	V	K	F	V	R	G	K	G	V	Y	L	Y	D	E	E	G	K	E	Y	L	D	F	V	S	G	I	G	V	N	S	L	G	H	A	Y	P	K	L	T	E	A	L	K	E	Q	V	E	K	L	L	H	V	S	N	L	.	Y	E	N	P	W	Q	E	E	L	A	H	K	L
Template Known Secondary structure			S		S					.		S								B	T					T	T							S	S					T		T	T		B	S																S				T	T	.	S
Template Predicted Secondary structure										.																																																										.
Template SS confidence
		2	.	.	.	.	.	.	.		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.
Query SS confidence																																		.	.	.	.	.
Query Sequence		N	Q	K	V	P	G	D	F	A	K	K	T	L	L	V	T	T	G	S	E	A	V	E	N	A	V	K	I	A	R	A	A	.	.	.	.	.	T	K	R	S	G	T	I	A	F	S	G	A	Y	H	G	R	T	H	Y	T	L	A	L	T	G	K	V	N	P	Y	S	A	G	M	G	L	M	P	G	H	V	Y	R
Query Conservation																																		.	.	.	.	.
Alig confidence								.	.																									.	.	.	.	.
Template Conservation								.	.
Template Sequence		V	K	H	F	W	T	.	.	E	G	K	V	F	F	A	N	S	G	T	E	S	V	E	A	A	I	K	L	A	R	K	Y	W	R	D	K	G	K	N	K	W	K	F	I	S	F	E	N	S	F	H	G	R	T	Y	G	S	L	S	A	T	G	Q	P	K	F	H	K	G	F	E	P	L	V	P	G	F	S	Y	A
Template Known Secondary structure				T	S	S	S	.	.								S	S																			T	T										B	T					S	S								B		G	G	G	T	T	T	T		S			S	S
Template Predicted Secondary structure								.	.
Template SS confidence
		80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	Y	P	C	P	L	H	G	I	S	E	D	D	A	I	A	S	I	H	R	I	F	K	N	D	A	A	P	E	D	I	A	A	I	V	I	E	P	V	Q	G	E	G	G	F	Y	A	S	S	P	A	F	M	Q	R	L	R	A	L	C	D	E	H	G	I	M	L	I	A	D	E	V	Q	S	G	A	G	R	T
Query Conservation
Alig confidence					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		K	L	N	.	.	.	.	.	.	.	.	.	.	.	D	I	D	S	V	Y	K	L	L	D	.	.	.	.	.	E	E	T	A	G	I	I	I	E	V	I	Q	G	E	G	G	V	N	E	A	S	E	D	F	L	S	K	L	Q	E	I	C	K	E	K	D	V	L	L	I	I	D	E	V	Q	T	G	I	G	R	T
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.	.							T	T			.	.	.	.	.	T	T								S			T	T	T	T	S																			T								T	T	T	T	T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		158	.	160												.	.	.	.	.	.	.	.	.	170						.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	T	L	F	A	M	E	Q	M	G	V	A	P	D	L	T	T	F	A	K	S	I	A	G	G	F	P	L	A	G	V	T	G	R	A	E	V	M	D	A	V	A	P	G	G	L	G	G	T	Y	A	G	N	P	I	A	C	V	A	A	L	E	V	L	K	V	F	E	Q	E	N	L	L	Q	K	A	N	D	L	G
Query Conservation
Alig confidence																																																																			.	.
Template Conservation																																																																			.	.
Template Sequence		G	E	F	Y	A	Y	Q	H	F	N	L	K	P	D	V	I	A	L	A	K	G	L	G	G	G	V	P	I	G	A	I	L	A	R	E	E	V	A	Q	S	F	T	P	G	S	H	G	S	T	F	G	G	N	P	L	A	C	R	A	G	T	V	V	V	D	.	.	E	V	E	K	L	L	P	H	V	R	E	V	G
Template Known Secondary structure		S	S	S	S	G	G	G	G	G	T				S						G	G	G	G	T	T	S													T	T			T	T	S				S	S	T	T														.	.
Template Predicted Secondary structure																																																																			.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	K	L	K	D	G	L	L	A	I	A	E	K	H	P	E	I	G	D	V	R	G	L	G	A	M	I	A	I	E	L	F	E	D	G	D	H	N	K	P	D	A	K	L	T	A	E	I	V	A	R	A	R	D	K	G	L	I	L	L	S	C	G	P	Y	Y	N	V	L	R	I	L	V	P	L	T	I	E	D	A
Query Conservation
Alig confidence												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		N	Y	F	K	E	K	L	K	E	L	.	.	.	.	.	G	K	G	K	V	K	G	R	G	L	M	L	G	L	E	L	E	R	E	.	.	.	.	.	.	.	.	.	.	C	K	D	Y	V	L	K	A	L	E	K	G	L	L	I	N	C	T	A	.	.	G	K	V	L	R	F	L	P	P	L	I	I	Q	K	E
Template Known Secondary structure											T	.	.	.	.	.	T	S	S						T	T							S	S		.	.	.	.	.	.	.	.	.	.											T	T							T	.	.	T	T								T	T
Template Predicted Secondary structure												.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		300	.	.	.	.	.	.	.	.	.						310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.											.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.			.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		409	410	.	.	.	.	.	.	.	.	.	420	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	I	R	Q	G	L	E	I	I	S	Q	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		H	I	D	R	A	I	S	V	L	R	E	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions