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Job DescriptionP22256
Confidence99.96%DateThu Jan 5 11:38:48 GMT 2012
Rank67Aligned Residues327
% Identity11%Templatec1ynuA_
PDB info PDB header:lyaseChain: A: PDB Molecule:1-aminocyclopropane-1-carboxylate synthase; PDBTitle: crystal structure of apple acc synthase in complex with l-vinylglycine
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   76...80.........90........ .100.........110.........120.........130.........140.........150..
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Query Sequence  TCFQVLAYEPYLELCEIMNQKVP. . . GDFAKKTLLVTTGSEAVENAVKIARAATKRSGTIAFSGAYHGRTHYTLALTGKV
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Template Sequence  FQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCL. . ADPGEAVLIPTPYYPGFDRDLKWRTGVE
Template Known Secondary structure 


TT

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   82.......90.........100.........110.........120.........130. ........140.........150.........
 
   153......160.........170.........180.........190.........200.........210.........220.........230..
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Query Sequence  NPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEH
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Template Sequence  IVPIHCTSSNGFQI. . . . . . . . . . . . . . . . TETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDK
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GGGTT

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   160.........170... ......180.........190.........200.........210.........220...
 
   233......240.........250.... .....260.........270. ........280.........290.........300...
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Query Sequence  GIMLIADEVQSGAGRTGTLFAM. . . . . . . . EQMGVAPDLTTFAKSIA. GGFPLAGVTGRAEVMDAVAPGGLGGTYAGNPI
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Template Sequence  GIHLISDEIYSGTAFSSPSFISVMEVLKDSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQT
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TTGGG

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   224.....230.........240.........250.........260.........270.........280.........290.........300...
 
   304.....310.........320.........330.........340.........350.........360.........370.........380...
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Query Sequence  ACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARDK
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Template Sequence  QHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSGISCLNGNAGLFCWVDMRHLLRSN. . TFEAEMELWKKIVYE
Template Known Secondary structure  TT
TTT




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   310.........320.........330.........340.........350.........360.........370.. .......380.......
 
   384.....390..... ....400.........410.........420...
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Query Sequence  . GLILLSCGPYYN. . . . VLRILVPLTIEDAQIRQGLEIISQCFDE
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Template Sequence  VHLNISPGSSCHCTEPGWFRVCF. ANLPERTLDLAMQRLKAFVGE
Template Known Secondary structure  T

TTTTT
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   388.390.........400.........410 .........420.........430.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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