Job Description P08312 Confidence 98.79% Date Thu Jan 5 11:01:02 GMT 2012 Rank 63 Aligned Residues 157 % Identity 18% Template d1nyra4 SCOP info Class II aaRS and biotin synthetases Class II aaRS and biotin synthetases Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain Resolution 2.80

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.
Query Sequence		V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	.	.	.	.	.	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P
Query Conservation																																																						.	.	.	.	.
Alig confidence																															.	.	.	.	.																			.	.	.	.	.
Template Conservation																															.	.	.	.	.
Template Sequence		R	R	E	I	E	R	Y	I	V	D	K	E	V	S	M	G	Y	D	H	V	Y	T	P	V	L	A	N	V	D	.	.	.	.	.	L	Y	K	T	S	G	H	W	D	H	Y	Q	E	D	M	F	P	P	M	Q	L	D	E	T	E	S	M	V	L	R	P	M	N	C	P	H	H	M	M	I	Y	A	N	K	P	H
Template Known Secondary structure																T	T								S				T		.	.	.	.	.						T						T	T	S	S							T	T	T							S	S	S										T	S
Template Predicted Secondary structure																															.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.						.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
							184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.					.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.	.	.	.	.																			.	.	.	.	.																						.	.	.	.																						.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																			.	.	.	.	.																						.	.	.	.																						.	.	.	.	.	.
Query Sequence		.	.	.	.	.	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	.	.	.	.	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	.	.	.	.	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																			.	.	.	.	.																						.	.	.	.																						.	.	.	.	.	.
Alig confidence		.	.	.	.	.																			.	.	.	.	.																						.	.	.	.																						.	.	.	.	.	.
Template Conservation
Template Sequence		S	Y	R	E	L	P	I	R	I	A	E	L	G	T	M	H	R	Y	E	A	S	G	A	V	S	G	L	Q	R	V	R	G	M	T	L	N	D	S	H	I	F	V	R	P	D	Q	I	K	E	E	F	K	R	V	V	N	M	I	I	D	V	Y	K	D	F	G	F	E	D	Y	S	F	R	L	S	Y	R	D	P	E
Template Known Secondary structure		B	G	G	G																	T	T	T		B	T	T	T	B		S													G	G	G																			T	T
Template Predicted Secondary structure
Template SS confidence
		349	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.
		244	.	.	.	.																																	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	S	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L
Query Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	K	E	K	Y	F	D	D	D	D	M	W	N	K	A	E	N	M	L	K	E	A	A	D	E	L	G	L	S	Y	E	E	A	I	G	E	A	A	F	Y	G	P	K	L	D	V	Q	V	K	T	A	M	G	K	E	E	T	L	S
Template Known Secondary structure			S	S	S	S	S																													S		S	B	T	T	B										T	T	S
Template Predicted Secondary structure
Template SS confidence
		429	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions