Job Description P08312 Confidence 99.58% Date Thu Jan 5 11:01:02 GMT 2012 Rank 33 Aligned Residues 207 % Identity 18% Template c3pcoD_ PDB info PDB header:ligase Chain: D: PDB Molecule:phenylalanyl-trna synthetase, beta chain; PDBTitle: crystal structure of e. coli phenylalanine-trna synthetase complexed2 with phenylalanine and amp Resolution 3.02 Å

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		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.				.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150		.	.	.
Predicted Secondary structure																																																				.							.	.	.																	.
Query SS confidence																																																				.							.	.	.																	.
Query Sequence		E	S	A	A	L	N	A	R	L	A	A	E	T	I	D	V	S	L	P	G	R	R	I	E	N	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	.	T	G	P	E	I	E	.	.	.	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	.	A	R	A
Query Conservation																																																				.							.	.	.																	.
Alig confidence																																																				.							.	.	.																	.
Template Conservation
Template Sequence		L	V	E	E	V	A	R	V	Y	G	Y	N	N	I	P	D	E	P	V	Q	A	S	L	I	M	G	T	H	R	E	A	D	L	S	L	K	R	V	K	T	L	L	N	D	K	G	Y	Q	E	V	I	T	Y	S	F	V	D	P	K	V	Q	Q	M	I	H	P	G	V	E	A	L	L	L	P	S	P	I	S	V	E
Template Known Secondary structure												G	G	G	S																T	T	B													S	S								S				T	T						S	T	T					B		S	S		S		G	G
Template Predicted Secondary structure
Template SS confidence
		461	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.					.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.												.	.
Predicted Secondary structure																											.	.	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	.	.	.	.	K	A	Q	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	.	.	.	.	.	.	.	.	.	.	.	T	N
Query Conservation																											.	.	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.	.																.	.	.	.																				.																			.	.	.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.	.	.	.	.
Template Sequence		M	.	.	.	.	.	.	.	.	.	S	A	M	R	L	S	L	W	T	G	L	L	A	T	V	V	Y	N	Q	N	R	Q	Q	N	R	V	R	I	F	E	S	G	L	R	F	V	P	D	T	Q	A	P	L	G	I	R	Q	D	L	M	L	A	G	V	I	C	G	N	R	Y	E	E	H	W	N	L	A	K	E	T
Template Known Secondary structure		G	.	.	.	.	.	.	.	.	.					S		S														T	T																	T	T	S	S	T	T													S	B	S	S	S	S		T	T	S				B
Template Predicted Secondary structure			.	.	.	.	.	.	.	.	.
Template SS confidence
		541										.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
Predicted Secondary structure																																						.	.
Query SS confidence																																						.	.
Query Sequence		I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	.	.	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F
Query Conservation																																						.	.
Alig confidence																							.															.	.															.	.	.	.	.																		.	.	.
Template Conservation																							.																															.	.	.	.	.																		.	.	.
Template Sequence		V	D	F	Y	D	L	K	G	D	L	E	S	V	L	D	L	T	G	K	L	N	.	E	V	E	F	R	A	E	A	N	P	A	L	H	P	G	Q	S	A	A	I	Y	L	K	G	E	R	I	G	F	V	.	.	.	.	.	G	V	V	H	P	E	L	E	R	K	L	D	L	N	G	R	T	.	.	.	L	V	F
Template Known Secondary structure														S	S	S	S	S	S			S	.	S									S	S	S		G	G	G						S	T	T	S						.	.	.	.	.										S	S			S	S			.	.	.
Template Predicted Secondary structure																							.																															.	.	.	.	.																		.	.	.
Template SS confidence
		612	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.		.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.						.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.				680	.	.
		296	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	G	M	E	R	L	T
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	E	W	N	K	L	A
Template Known Secondary structure					G	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		683	.	.	.	.	.	.	690

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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