Job Description P08312 Confidence 98.42% Date Thu Jan 5 11:01:02 GMT 2012 Rank 79 Aligned Residues 121 % Identity 17% Template c3netB_ PDB info PDB header:ligase Chain: B: PDB Molecule:histidyl-trna synthetase; PDBTitle: crystal structure of histidyl-trna synthetase from nostoc sp. pcc 7120 Resolution 2.70 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.						.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure																													.	.	.	.	.																																														.	.	.
Query SS confidence																													.	.	.	.	.																																														.	.	.
Query Sequence		V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	.	.	.	.	.	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	.	.	.
Query Conservation																													.	.	.	.	.																																														.	.	.
Alig confidence																													.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.
Template Sequence		E	L	Y	L	L	D	T	I	R	R	V	Y	E	S	Y	G	F	T	P	I	E	T	P	A	V	E	R	L	E	V	L	Q	A	K	G	N	Q	D	N	I	I	Y	G	L	E	P	I	L	E	A	.	.	.	.	.	.	.	.	.	.	R	A	L	K	F	D	Q	T	V	P	L	A	A	Y	I	A	R	H	L	N
Template Known Secondary structure																T	T								S									T	T	T					B			B								.	.	.	.	.	.	.	.	.	.					S		S												G	G
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.											.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
			181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure		.																																							.	.	.	.
Query SS confidence		.																																							.	.	.	.
Query Sequence		.	Q	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	.	.	.	.	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F
Query Conservation		.																																							.	.	.	.
Alig confidence		.																		.	.	.	.																		.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		D	L	T	F	P	F	A	R	Y	Q	X	D	V	V	F	R	G	E	.	.	.	.	R	F	R	Q	F	R	Q	C	D	I	D	V	V	G	R	E	K	L	S	L	L	Y	D	A	Q	X	P	A	I	I	T	E	I	F	E	A	V	N	I	G	D	F	V	I	R	I
Template Known Secondary structure		G	S		S	S												B		.	.	.	.			S												S	S				T																		T
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions