Job Description P08312 Confidence 99.62% Date Thu Jan 5 11:01:02 GMT 2012 Rank 31 Aligned Residues 178 % Identity 21% Template c3m4qA_ PDB info PDB header:ligase Chain: A: PDB Molecule:asparaginyl-trna synthetase, putative; PDBTitle: entamoeba histolytica asparaginyl-trna synthetase (asnrs) Resolution 3.00 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I	A
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.				.					.	.
Template Conservation																										.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.				.					.	.
Template Sequence		S	E	I	Q	W	Y	F	R	K	Y	Y	H	D	N	H	F	T	E	I	Q	P	P	T	I	.	.	.	.	.	.	.	.	V	K	T	T	L	F	K	L	Q	Y	F	N	E	P	A	Y	L	T	Q	S	S	Q	L	Y	L	E	.	.	.	.	.	.	.	.	S	V	I	.	A	S	L	G	.	.	K	S	F	C
Template Known Secondary structure															T	T								S		.	.	.	.	.	.	.	.											T	T							S								.	.	.	.	.	.	.	.				.					.	.	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.																											.	.	.	.	.	.	.	.				.					.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.									.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.									.	.	.		.	.	210	.			.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	R	V	Y	R	N	D	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.																.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.																.	.
Template Sequence		M	L	S	S	Y	R	A	E	.	.	.	.	H	L	A	E	Y	L	H	L	E	A	E	L	P	F	I	.	.	S	F	E	D	L	L	N	H	L	E	D	L	V	C	T	V	I	D	N	V	M	A	V	H	G	D	K	I	R	K	M	N	P	H	L	K	L	P	T	R	P	F	K	R	M	T	Y	A	D	A	I
Template Known Secondary structure										.	.	.	.			S											S		.	.																																	T	T						S	S
Template Predicted Secondary structure										.	.	.	.																.	.
Template SS confidence
		222	.	.	.	.	.	.	.					230	.	.	.	.	.	.	.	.	.	240	.	.	.	.			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.
																																			235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.									.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	.	.	.	.	.	.	.	.	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	C	N	D	H	G	I	L	N	K	D	K	P	F	E	Y	G	E	D	I	S	E	K	P	E	R	Q	M	T	D	E	I	G	C	P	I	F	M	I	H	F	P	S	K	M	K	A	F	Y	M	S	K	V	P	G	H	P	D	L	T	E	S	V	D	L	L	M	P	G	V	G	E	I	V	G	G	S	M	R
Template Known Secondary structure								T			S	S	S	S				T	T																	S								B	G	G	G	S		S	S	B				T	T													T	T	T
Template Predicted Secondary structure
Template SS confidence
		302	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
		274	.	.	.	.	.	280	.	.	.					.	.	.	.	.	.															290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	H	P	N	V	L	R	N	V	.	.	.	.	G	I	D	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S
Query Conservation												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.							.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																																							.	.
Template Sequence		I	W	N	Y	D	E	L	M	G	A	Y	K	A	N	G	L	N	P	D	P	Y	Y	W	Y	T	Q	Q	R	K	Y	G	S	C	P	H	G	G	.	.	Y	G	L	G	V	E	R	L	V	M	W	L	L	G	E	D	H	I	R	K
Template Known Secondary structure															T	T				G	G	G									T	T							.	.														T		S	S	G	G	G
Template Predicted Secondary structure																																							.	.
Template SS confidence
		382	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.			.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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