 |
Job Description | P08312 | Confidence | 45.67% | Date | Thu Jan 5 11:01:02 GMT 2012 |
Rank | 103 | Aligned Residues | 92 |
% Identity | 15% | Template | c3ls1A_ |
PDB info |
PDB header:photosynthesis | Chain: A: PDB Molecule:sll1638 protein; |
PDBTitle: crystal structure of cyanobacterial psbq from synechocystis2 sp. pcc 6803 complexed with zn2+
|
Resolution | 1.85 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | |
. | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
. | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | H | L | A | E | L | V | A | S | A | K | A | A | I | S | Q | A | S | D | V | A | A | L | D | N | V | R | V | E | Y | L | G | K | K | G | H | L | T | L | Q | M | T | T | L | . |
R | E | L | P | P | E | E | R | P | A | A | G | A | V | I | N | E | A | K | E | Q | V | Q | Q | A | . |
L | N | A | R | K | A | E | L | E |
Query Conservation |   |
  |   |
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |
|
|
|
|
|   |
|   |   |   |   |   |   |
| . |   |   |
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|   |   |
|   |   |   | . |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|
|
|   |   |   |
|   |   |
|
|   |
|   |   |
|   |   |
|
|   |   |
|
|
|
|   |
|   |
|
|   |
|
|   |   |
|   |   |   |
|   |   |   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |
|
|   |
|
|   |
|
|
|   |
|
|   |   |
Template Sequence |   |
N | P | I | A | V | A | R | D | G | M | E | K | R | L | Q | G | L | I | A | D | Q | N | W | V | D | T | Q | T | Y | I | H | G | P | L | G | Q | L | R | R | D | M | L | G | L | A | S | S | L | L | P | K | D | Q | D | K | A | K | T | L | A | K | E | V | F | G | H | L | E | R | L | D | A | A | A | K | D | R | N | G | S |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  | T | T | T | T | T |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
46 | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | A | A | L | N | A | R | L | A | A | E | T | I | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |   |
|   |   |   |
|   |   |
|
|
Template Sequence |   |
Q | A | K | I | Q | Y | Q | E | A | L | A | D | F | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
126 | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|