Job Description P08312 Confidence 99.61% Date Thu Jan 5 11:01:02 GMT 2012 Rank 32 Aligned Residues 182 % Identity 12% Template c3ig2B_ PDB info PDB header:ligase Chain: B: PDB Molecule:phenylalanyl-trna synthetase beta chain; PDBTitle: the crystal structure of a putative phenylalanyl-trna synthetase2 (phers) beta chain domain from bacteroides fragilis to 2.1a Resolution 2.09 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.
Predicted Secondary structure																																																																										.	.	.	.
Query SS confidence																																																																										.	.	.	.
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	.	.	.	.	Q	P	P	I
Query Conservation																																																																										.	.	.	.
Alig confidence																															.																	.																										.	.	.	.
Template Conservation																															.																	.
Template Sequence		N	K	L	Q	N	L	V	A	E	Q	L	V	G	C	G	F	N	E	I	L	N	N	S	L	T	R	A	A	Y	.	Y	D	G	L	E	S	Y	P	S	K	N	L	V	X	L	L	.	N	P	L	S	A	D	L	N	C	X	R	Q	T	L	L	F	G	G	L	E	S	I	A	H	N	A	N	R	K	N	A	D	L
Template Known Secondary structure															T	T								S				G	G	G	.	G	T	T		S	S	S		G	G	G					S	.	S		S	B	T	T	B	S				S		S											T			S	S	S
Template Predicted Secondary structure																															.																	.
Template SS confidence
		507	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.		.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.									.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.	.	.	.	.	.	.
Query SS confidence																															.	.	.	.	.	.	.	.
Query Sequence		R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	.	.	.	.	.	.	.	.	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	S	A	E	V
Query Conservation																															.	.	.	.	.	.	.	.
Alig confidence																			.	.											.	.	.	.	.	.	.	.																													.
Template Conservation																			.	.																																															.
Template Sequence		K	F	F	E	F	G	N	C	Y	H	F	D	L	A	P	Y	S	.	.	E	D	Y	H	L	G	L	W	V	T	G	K	X	V	S	N	S	W	A	E	N	T	S	V	Y	E	L	K	A	Y	V	E	N	I	F	K	R	L	G	L	D	L	H	S	L	V	.	V	G	N	L	S	D	D	I	Y	S	T	A	L	T
Template Known Secondary structure																			.	.																																						T	T			G	G	G			.						S	S	S
Template Predicted Secondary structure																			.	.																																															.
Template SS confidence
		585	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.			.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.		.	.	650	.	.	.	.	.	.	.	.	.	660	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L
Query Conservation
Alig confidence									.	.	.																							.	.	.
Template Conservation									.	.	.																							.	.	.
Template Sequence		V	N	T	K	G	G	K	.	.	.	R	L	A	T	F	G	V	V	T	K	K	X	L	K	A	F	D	V	D	N	E	V	.	.	.	Y	Y	A	D	L	N	W	K	E	L
Template Known Secondary structure					T	T			.	.	.																T	T						.	.	.
Template Predicted Secondary structure									.	.	.																							.	.	.
Template SS confidence
		674	.	.	.	.	.	680				.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.				.	.	.	.	.	.	.	710	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions