Job Description P08312 Confidence 98.58% Date Thu Jan 5 11:01:02 GMT 2012 Rank 73 Aligned Residues 190 % Identity 15% Template c3ialB_ PDB info PDB header:ligase Chain: B: PDB Molecule:prolyl-trna synthetase; PDBTitle: giardia lamblia prolyl-trna synthetase in complex with prolyl-2 adenylate Resolution 2.20 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.									.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.							.	.
Query SS confidence																											.	.	.	.	.	.	.	.							.	.
Query Sequence		V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	.	.	.	.	.	.	.	.	E	D	D	Y	H	N	.	.	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M
Query Conservation																											.	.	.	.	.	.	.	.							.	.
Alig confidence																											.	.	.	.	.	.	.	.							.	.																								.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.
Template Sequence		E	N	A	I	M	R	L	C	E	E	E	Y	A	K	V	G	I	S	Q	I	L	F	P	T	V	I	P	E	S	F	L	K	K	E	S	D	H	I	K	G	F	E	A	E	C	F	W	V	E	K	G	G	L	Q	P	L	E	E	R	L	A	L	R	P	.	.	.	.	.	.	.	T	S	E	T	A	I	Y	S	M
Template Known Secondary structure																T	T								S								T	S	S								G	G	G								T	T											S	.	.	.	.	.	.	.	S	S
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.
		179	180							.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.					.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.						.	220	.	.	.	.	.	.	.	.	.	230	.	.	.		.	.	.	.	.	.	240	.	.
Predicted Secondary structure				.	.	.	.	.	.																						.	.	.	.																		.	.	.	.	.																.
Query SS confidence				.	.	.	.	.	.																						.	.	.	.																		.	.	.	.	.																.
Query Sequence		K	A	.	.	.	.	.	.	Q	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	.	.	.	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	.	.	.	.	.	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	.	F	F	E	E	D	L	Q	I	R
Query Conservation				.	.	.	.	.	.																						.	.	.	.																		.	.	.	.	.																.
Alig confidence				.	.	.	.	.	.																						.	.	.	.																		.	.	.	.	.																.
Template Conservation
Template Sequence		F	S	K	W	V	R	S	Y	K	D	L	P	L	K	I	H	Q	T	C	T	I	F	R	H	E	T	K	N	T	K	P	L	I	R	V	R	E	I	H	W	N	E	A	H	C	C	H	A	T	A	E	D	A	V	S	Q	L	S	D	Y	W	K	V	I	D	T	I	F	S	D	E	L	C	F	K	G	Q	K	L	R
Template Known Secondary structure							S	B	G	G	G														T	T			S		B	T	T	T	B		S												S	S																				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		243	.	.		.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure					.																																																.	.	.	.	.	.	.
Query SS confidence					.																																																.	.	.	.	.	.	.
Query Sequence		F	R	P	.	S	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	.	.	.	.	.	.	.	F	A	F	G	M	G	M	E	R	L	T	M	L	R
Query Conservation					.																																																.	.	.	.	.	.	.
Alig confidence					.																																																.	.	.	.	.	.	.							.
Template Conservation																																																																		.
Template Sequence		R	V	C	W	D	R	F	P	G	A	D	Y	S	E	V	S	D	V	V	M	P	C	G	R	V	L	Q	T	A	G	I	H	N	L	G	Q	R	F	S	S	T	F	D	I	L	Y	A	N	K	A	N	E	S	V	H	P	Y	L	T	C	A	G	I	S	.	T	R	V	L	A	C	A
Template Known Secondary structure				G	G	G			T	T		S										T	T	S													T						T	T						T	T															.	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.		.	300	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions