Job Description P08312 Confidence 99.63% Date Thu Jan 5 11:01:02 GMT 2012 Rank 30 Aligned Residues 171 % Identity 24% Template c3i7fA_ PDB info PDB header:ligase Chain: A: PDB Molecule:aspartyl-trna synthetase; PDBTitle: aspartyl trna synthetase from entamoeba histolytica Resolution 2.80 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I	A
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.
Template Sequence		S	A	C	C	G	L	F	R	E	F	L	T	S	Q	K	F	V	E	I	H	T	P	K	L	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	L	A	Q	S	P	Q	L	Y	K	Q	.	.	.	.	.	.	.	.	M	A	I	M	G	D	F	R	.	.	K	V	F	E
Template Known Secondary structure															T	T								S	B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		B		S		T						.	.	.	.	.	.	.	.				T	T	T			.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.									.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.																						270	.	.	.	.	.	.	.	.	.	280									.	.	.	.	.	.	.	.			.	290	.	.
		190	.	.	.	.	.	.	.		.	.	200		.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure										.				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	R	V	Y	R	N	D	.	Y	D	Q	.	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.				.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	G	P	V	F	R	A	E	N	S	N	T	R	R	H	L	T	E	F	E	G	L	D	I	E	M	E	I	V	E	N	Y	H	E	C	I	D	V	M	E	K	L	F	T	F	I	F	D	E	I	P	K	R	F	P	D	E	L	K	V	I	R	K	Q	Y	P	F	E	D	L	I	Y	R	P	F	L	R	L	T	Y
Template Known Secondary structure									S				S	S	S			S												S	S		T																																	S									S
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
																				217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.		.	.	.	.	.	.	.	250	.	.	.									.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.												.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.												.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	.	F	R	P	S	Y	F	P	F	T	E	P	.	.	.	.	.	.	.	.	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.												.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.												.	.	.	.	.	.	.	.									.			.	.
Template Conservation																																																																										.			.	.
Template Sequence		K	E	A	I	E	M	L	R	A	S	G	E	T	I	G	D	Y	D	D	F	T	T	P	Q	E	V	K	L	G	E	L	I	K	A	K	Y	N	T	D	F	Y	I	L	D	K	F	P	A	A	I	R	P	F	Y	T	M	P	D	I	D	D	P	N	Y	S	N	S	Y	D	V	F	V	.	R	G	.	.	Q	E	I
Template Known Secondary structure											T	T					T	T																						S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							.	T	T	.	.
Template Predicted Secondary structure																																																																										.			.	.
Template SS confidence
		392	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.		.	.			.	.	.
		270	.	.	.	.			.	.	.	.	.	280	.	.	.					.	.	.	.	.	.	290	.	.	.	.													.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure							.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	G	C	G	M	.	.	V	H	P	N	V	L	R	N	V	.	.	.	.	G	I	D	P	E	V	Y	S	G	F	A	.	.	.	.	.	.	.	.	.	.	.	.	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S
Query Conservation							.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.										.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	S	G	A	Q	R	I	H	D	P	E	F	L	M	K	R	C	I	E	K	G	V	D	P	A	T	L	K	D	Y	I	E	S	F	R	F	G	S	W	P	H	A	G	C	G	I	G	L	E	R	I	T	M	L	Y	L	G	I	P	N	I	R	K
Template Known Secondary structure																					T	T			G	G	G	G						T	T	S	S																				T	T		S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions