Job Description P08312 Confidence 98.66% Date Thu Jan 5 11:01:02 GMT 2012 Rank 70 Aligned Residues 215 % Identity 17% Template c3a32A_ PDB info PDB header:ligase Chain: A: PDB Molecule:probable threonyl-trna synthetase 1; PDBTitle: crystal structure of putative threonyl-trna synthetase2 thrrs-1 from aeropyrum pernix Resolution 2.30 Å

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		87	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure														.																																																																		.	.
Query SS confidence														.																																																																		.	.
Query Sequence		L	A	A	E	T	I	D	V	S	L	P	G	.	R	R	I	E	N	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	.	.
Query Conservation														.																																																																		.	.
Alig confidence														.																																								.	.	.	.	.																						.	.
Template Conservation																																																						.	.	.	.	.
Template Sequence		F	N	R	E	F	A	T	F	T	G	A	G	V	P	L	F	S	L	G	G	G	P	I	R	Y	A	L	A	E	V	L	A	K	F	H	A	R	R	G	Y	Y	V	V	E	T	P	I	I	A	S	T	E	.	.	.	.	.	L	F	K	V	S	G	H	I	E	F	Y	R	N	N	M	Y	L	F	D	I	E	G	H
Template Known Secondary structure		T		S	B	T						T	T				B		T	T																			T	T								S				T		.	.	.	.	.					T				T	T	G	G	G	G	S						T	T
Template Predicted Secondary structure																																																						.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80						.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
			164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.									.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure		.																					.	.	.	.	.	.	.	.																			.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence		.																					.	.	.	.	.	.	.	.																			.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		.	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	.	.	.	.	.	.	.	.	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	.	.	.	.	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	.	.	.	.	.	.	.
Query Conservation		.																					.	.	.	.	.	.	.	.																			.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence		.																					.	.	.	.	.	.	.	.																			.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	F	A	V	K	P	M	N	C	P	Y	H	I	L	L	F	L	N	E	V	A	K	H	R	S	K	L	P	L	P	F	K	V	F	E	F	G	R	V	H	R	Y	E	P	S	G	S	I	Y	G	L	L	R	V	R	G	F	T	Q	D	D	A	H	I	I	V	P	G	G	R	V	I	D	V	V	Y	D	V	F	E
Template Known Secondary structure							S		S																G	G	G	S		S	S															G	G	G		B	T	T	T	B		S													G	G	G
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.																																														.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	S	Y	F	P	F	T	E	P	S	A	E	V
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	M	K	L	V	L	E	R	L	F	K	L	G	V	S	S	E	T	F	K	V	R	L	S	M	S	D	K	S	L	I	G	K	E	F	M	G	S	K	E	E	W	E	G	A	E	E	A	L	R	E	A	A	S	R	I	N	E	K	Y	G	I	D	I	V	E	L	E	G	E	A	A	F	Y	G	P	K	L	D	F
Template Known Secondary structure										T	S					S	T	T	T										G	G	G	B	T	T	T	B		S																															T	T		S	B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.													.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	.	.	.	.	.	.	.	.	.	.	.	.	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	M	M	V	E	E	S	G	V	S	K	E	W	Q	M	G	T	I	Q	F	D	F	N	L	P	R	R	F	R	L	Y	D	V	V	R	E	E	F	G	I	E	E	V	Y	I	I	H	R	A	L	L	G	S	I	E	R	F	L	G	V	Y
Template Known Secondary structure							S	S	S														S	S					T	T												S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions