Job Description P08312 Confidence 93.20% Date Thu Jan 5 11:01:02 GMT 2012 Rank 96 Aligned Residues 122 % Identity 19% Template c2zzfA_ PDB info PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of alanyl-trna synthetase without2 oligomerization domain Resolution 2.70 Å

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		182	.	.	.	.	.	.	.	190	.	.	.	.	.		.	.				.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.						.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure																.			.	.	.		.	.																			.	.	.	.	.
Query SS confidence																.			.	.	.		.	.																			.	.	.	.	.
Query Sequence		Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	.	N	D	.	.	.	Y	.	.	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	.	.	.	.	.	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F
Query Conservation																.			.	.	.		.	.																			.	.	.	.	.
Alig confidence																.			.	.	.		.	.																			.	.	.	.	.
Template Conservation
Template Sequence		P	P	A	N	P	L	V	I	S	Q	P	S	I	R	F	T	D	I	D	N	V	G	I	T	G	R	H	F	T	I	F	E	M	M	A	H	H	A	F	N	Y	P	G	K	P	I	Y	W	M	D	E	T	V	E	L	A	F	E	F	F	T	K	E	L	K	M	K	P	E	D	I	T	F	K	E	N	P	W	A	G
Template Known Secondary structure			S	S	S	S										S	T	T	G	G	G	T	T	T	S	S	S			S												B	T	T	B																			T	S				G	G	G
Template Predicted Secondary structure
Template SS confidence
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		251				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		T	.	.	.	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L
Query Conservation			.	.	.
Alig confidence			.	.	.									.	.	.	.	.														.	.	.	.
Template Conservation														.	.	.	.	.														.	.	.	.
Template Sequence		G	G	N	A	G	P	A	F	E	V	L	Y	.	.	.	.	.	R	G	L	E	V	A	T	L	V	F	M	Q	Y	.	.	.	.	K	K	K	Y	I	P	M	E	T	K	V	V	D	T	G	Y	G	L	E	R	L	V	W	M	S	Q	G	T	P	T	A
Template Known Secondary structure		S	S											.	.	.	.	.	T	T												.	.	.	.																													S	S
Template Predicted Secondary structure														.	.	.	.	.														.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.						.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions