Job Description P08312 Confidence 93.21% Date Thu Jan 5 11:01:02 GMT 2012 Rank 95 Aligned Residues 179 % Identity 15% Template c2ztgA_ PDB info PDB header:ligase Chain: A: PDB Molecule:alanyl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus alanyl-trna2 synthetase lacking the c-terminal dimerization domain in3 complex with ala-sa Resolution 2.20 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I
Query Conservation
Alig confidence																													.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	D	E	X	R	E	Y	Y	L	N	F	F	E	R	R	G	H	G	R	I	E	R	Y	P	V	V	A	.	R	W	R	T	D	I	Y	L	T	I	A	S	I	A	D	F	Q	P	F	V	T	S	G	V	A	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	P	A	N	P	L	T
Template Known Secondary structure															T	T	T									S	B		.	T	T		S	S	B	S	B			S	G	G	G	G	G	T	T	T	T	T	T	S	S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	S	S
Template Predicted Secondary structure																													.																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.																				.	.	.	.	.	120	.
		189	190	.	.	.	.	.		.	.				.			.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.					.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.
Predicted Secondary structure									.			.	.	.		.	.																			.	.	.	.																																				.	.	.
Query SS confidence									.			.	.	.		.	.																			.	.	.	.																																				.	.	.
Query Sequence		A	P	G	R	V	Y	R	.	N	D	.	.	.	Y	.	.	D	Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	.	.	.	.	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	.	.	.	E	P	S	A
Query Conservation									.			.	.	.		.	.																			.	.	.	.																																				.	.	.
Alig confidence									.			.	.	.		.	.																			.	.	.	.																																				.	.	.
Template Conservation
Template Sequence		I	S	Q	P	C	I	R	L	D	D	L	D	S	V	G	R	T	G	R	H	L	T	L	F	E	X	X	A	H	H	A	F	N	Y	P	G	K	E	I	Y	W	K	N	E	T	V	A	Y	C	T	E	L	L	N	E	L	G	V	K	K	E	D	I	V	Y	K	E	E	P	W	A	G	G	G	N	A	G	P	C	L
Template Known Secondary structure									G	G	G	G	G	G	T	T	T	S	S	S			S												B	T	T	B		S																		T			G	G	G											T	T
Template Predicted Secondary structure
Template SS confidence
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.								.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure																																							.	.	.	.	.	.	.
Query SS confidence																																							.	.	.	.	.	.	.
Query Sequence		E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	.	.	.	.	.	.	.	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L
Query Conservation																																							.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.																											.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		E	A	I	V	G	G	.	.	.	.	.	L	E	V	A	T	L	V	F	X	N	L	E	E	H	P	E	G	D	I	E	I	K	G	A	R	Y	R	K	X	D	N	Y	I	V	D	T	G	Y	G	L	E	R	F	V	W	A	S	K	G	T	P	T	V
Template Known Secondary structure						T	T	.	.	.	.	.															T	T						T	T																												S	S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		202	.	.	.	.	.						.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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