Job Description P08312 Confidence 100.00% Date Thu Jan 5 11:01:02 GMT 2012 Rank 10 Aligned Residues 258 % Identity 17% Template c2znjB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein; PDBTitle: crystal structure of pyrrolysyl-trna synthetase from2 desulfitobacterium hafniense Resolution 2.50 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	E	L	P	P	E	E	R	P	A	A	G	A	V	I	N	E	A	K	E	Q	V	Q	Q	A	L	N	A	R	K	A	E	L	E	S	A	A	L	N	A	R	L	A	A	E	T	I	D	V	S	L	P	G	R	R	I	E	N	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G
Query Conservation
Alig confidence																																																				.	.	.	.	.
Template Conservation																																																				.	.	.	.	.
Template Sequence		W	T	K	V	Q	Y	Q	R	L	K	E	L	N	A	S	G	E	Q	L	E	M	G	F	S	D	A	L	S	R	D	R	A	F	Q	G	I	E	H	Q	L	M	S	Q	G	K	R	H	L	E	Q	.	.	.	.	.	L	R	T	V	K	H	R	P	A	L	L	E	L	E	E	K	L	A	K	A	L	H	Q	Q	G
Template Known Secondary structure				T	T								T	T										B	S	S																										.	.	.	.	.				T	T		S																	T	T
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.						.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.					.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																																																											.	.	.	.																	.
Query SS confidence																																																											.	.	.	.																	.
Query Sequence		F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	.	.	.	.	Q	P	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	D
Query Conservation																																																											.	.	.	.																	.
Alig confidence														.																.	.																												.	.	.	.																	.
Template Conservation														.																.	.
Template Sequence		F	V	Q	V	V	T	P	T	I	I	T	K	.	S	A	L	A	K	M	T	I	G	E	D	H	P	L	F	.	.	S	Q	V	F	W	L	D	G	K	K	C	L	R	P	M	L	A	P	N	L	Y	T	L	W	R	E	L	E	R	L	W	D	K	P	I	R	I	F	E	I	G	T	C	Y	R	K	E	S	Q	G
Template Known Secondary structure									S					.					T	T	T		S	S	S	S	T			.	.			S		B	S	S	S	S					S	S	S													T	T	S		S	S													S			S
Template Predicted Secondary structure														.																.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100		.	.	.	.	.	.	.	.	.	110	.	.	.	.	.			.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.			.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		Q	T	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	.	.	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P
Query Conservation																									.	.
Alig confidence																									.	.																			.	.																		.	.	.	.	.					.
Template Conservation																																													.	.																		.	.	.	.	.					.
Template Sequence		A	Q	H	L	N	E	F	T	M	L	N	L	T	E	L	G	T	P	L	E	E	R	H	Q	R	L	E	D	M	A	R	W	V	L	E	A	A	G	I	R	E	F	E	.	.	L	V	T	E	S	S	V	V	Y	G	D	T	V	D	V	M	K	.	.	.	.	.	G	D	L	E	.	L	A	S	G	A	M	G	P
Template Known Secondary structure		S				S											T			G	G	G																	T						.	.							S	S	S	S								.	.	.	.	.	T	T			.								S
Template Predicted Secondary structure																																													.	.																		.	.	.	.	.					.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.			.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.						.	.	.	.		230	.	.	.	.	.	.	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S	F	F	E	N	D	L
Query Conservation
Alig confidence															.	.
Template Conservation															.	.
Template Sequence		H	F	L	D	E	K	W	E	I	F	D	P	W	.	.	V	G	L	G	F	G	L	E	R	L	L	M	I	R	E	G	T	Q	H	V	Q	S	M	A	R	S	L	S
Template Known Secondary structure			T	T	T	T	T	T	T			S			.	.																T		S		G	G	G	G	S	S		S	S
Template Predicted Secondary structure															.	.
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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