Job Description P08312 Confidence 99.69% Date Thu Jan 5 11:01:02 GMT 2012 Rank 27 Aligned Residues 188 % Identity 18% Template c2xgtB_ PDB info PDB header:ligase Chain: B: PDB Molecule:asparaginyl-trna synthetase, cytoplasmic; PDBTitle: asparaginyl-trna synthetase from brugia malayi complexed2 with the sulphamoyl analogue of asparaginyl-adenylate Resolution 1.90 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	Q	P	P	I	R	I	I	A
Query Conservation
Alig confidence																																								.	.																			.	.	.	.	.	.	.	.			.						.	.
Template Conservation																																								.	.																			.	.	.	.	.	.	.	.			.						.	.
Template Sequence		A	A	A	T	R	A	M	R	E	H	F	Y	N	A	G	Y	V	E	V	A	P	P	T	L	V	Q	T	Q	V	E	G	G	S	T	L	F	N	L	.	.	D	Y	F	G	E	Q	S	F	L	T	Q	S	S	Q	L	Y	L	E	.	.	.	.	.	.	.	.	T	C	.	I	P	T	L	G	.	.	D	V	F	C
Template Known Secondary structure															T	T								S			S			S	S		G	G	G					.	.			T	T							S		S						.	.	.	.	.	.	.	.			.					S	.	.	S
Template Predicted Secondary structure																																								.	.																			.	.	.	.	.	.	.	.			.						.	.
Template SS confidence
		249	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.									.	.		.	.	.	310	.			.	.	.	.
		190	.	.	.	.	.	.	.		.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure										.					.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.					.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	G	R	V	Y	R	N	D	.	Y	D	Q	T	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation										.					.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.					.																.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																															.	.
Template Sequence		I	A	Q	S	Y	R	A	E	K	S	R	T	R	R	H	L	A	E	Y	A	H	V	E	A	E	C	P	F	I	.	.	T	L	D	D	L	M	E	K	I	E	E	L	V	C	D	T	V	D	R	L	L	A	D	E	E	A	K	K	L	L	E	H	I	N	P	K	F	Q	P	P	E	R	P	F	L	R	M	E	Y
Template Known Secondary structure											S		B	T	T	B		S											S		.	.																						T	S												T	T						S	S
Template Predicted Secondary structure																															.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.
																																								235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.									.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	.	.	.	.	.	.	.	.	S	A	E	V	D	V	M	G	K	N	G	K	W	L	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	A	I	K	W	L	Q	E	H	N	V	E	N	E	F	G	N	T	F	T	Y	G	E	D	I	A	E	A	A	E	R	F	M	T	D	T	I	N	K	P	I	L	L	N	R	F	P	S	E	I	K	A	F	Y	M	Q	R	D	A	Q	D	N	T	L	T	E	S	V	D	L	L	M	P	G	V	G	E	I	V
Template Known Secondary structure											T	T		B		T	T	S	S	B			T	T	S															T	S								B	G	G	G	S		T	T	B		B		S	S		T	T	B	B	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		394	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		269	270	.	.	.	.	.	.	.	.	.	280					.	.	.	.	.	.	.	.	.															290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	L	G	C	G	M	V	H	P	N	V	L	.	.	.	.	R	N	V	G	I	D	P	E	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S
Query Conservation														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.				.	.
Template Conservation																																												.	.
Template Sequence		G	G	S	M	R	I	W	K	F	D	E	L	S	K	A	F	K	N	V	E	I	D	P	K	P	Y	Y	W	Y	L	D	Q	R	L	Y	G	T	C	P	H	G	G	.	.	Y	G	L	G	L	E	R	F	I	C	W	L	T	N	T	N	H	I	R	D
Template Known Secondary structure						B														T	T			S	G	G	G									T	T							.	.														T		S	S	G	G	G
Template Predicted Secondary structure																																												.	.
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.			.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions