Job Description P08312 Confidence 100.00% Date Thu Jan 5 11:01:02 GMT 2012 Rank 6 Aligned Residues 247 % Identity 24% Template c2du4B_ PDB info PDB header:ligase/rna Chain: B: PDB Molecule:o-phosphoseryl-trna synthetase; PDBTitle: crystal structure of archaeoglobus fulgidus o-phosphoseryl-2 trna synthetase complexed with trnacys Resolution 2.80 Å

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		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.			.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		Q	Q	A	L	N	A	R	K	A	E	L	E	S	A	A	L	N	A	R	.	.	L	A	A	E	T	I	D	V	S	L	P	G	R	R	I	E	N	G	G	L	H	P	V	T	R	T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I
Query Conservation																					.	.
Alig confidence																					.	.																																																											.
Template Conservation																																																																																	.
Template Sequence		Q	K	Y	R	E	L	A	E	K	D	F	E	A	A	W	K	A	G	K	E	I	L	A	E	R	S	P	N	E	L	Y	P	R	V	G	F	S	F	G	K	E	H	P	L	F	A	T	I	Q	R	L	R	E	A	Y	L	S	I	G	F	S	E	V	V	N	P	L	I	V	E	D	V	H	V	K	K	Q	F	G	.
Template Known Secondary structure										S									G	G	G	G	S					G	G	G	S	T	T	S	S																							T	T	T												T								T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.												.	.	.	.	.	.	.	.	170	.	.				.	.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.		.		.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.												.	.	.												.															.		.
Query SS confidence																		.	.	.	.	.	.	.	.	.	.	.												.	.	.												.															.		.
Query Sequence		P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	.	.	.	.	.	.	.	.	.	.	.	T	T	R	L	L	R	T	Q	T	S	G	.	.	.	V	Q	I	R	T	M	K	A	Q	Q	P	.	P	I	R	I	I	A	P	G	R	V	Y	R	N	D	.	Y	.	D	Q	T	H	T	P	M	F	H	Q
Query Conservation																		.	.	.	.	.	.	.	.	.	.	.												.	.	.												.															.		.
Alig confidence								.	.									.	.	.	.	.	.	.	.	.	.	.												.	.	.												.															.		.
Template Conservation								.	.
Template Sequence		R	E	A	L	A	V	.	.	L	D	R	C	F	Y	L	A	T	L	P	K	P	N	L	K	P	I	S	S	T	L	T	L	R	S	H	M	T	T	G	W	F	I	T	L	S	H	I	A	D	K	L	P	L	P	I	K	L	F	S	I	D	R	C	F	R	R	E	Q	G	E	D	A	T	R	L	Y	T	Y	F	S
Template Known Secondary structure		T	T					.	.	G	G	G	S																						S	S	T									T	T	T	T	T	T	S		S															T	T		T	T	T			S
Template Predicted Secondary structure								.	.
Template SS confidence
		85	.	.	.	.	90			.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260												.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	E	G	L	I	V	D	T	N	I	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P	S	A	E	V	D	V	M	.	.	.	.	.	.	.	.	.	.	.	G	K	N	G	K	W	L	E	V	L	G	C	G	M	V	H	P
Query Conservation																																																						.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	S	C	V	L	V	D	E	E	L	S	V	D	D	G	K	A	V	A	E	A	L	L	R	Q	F	G	F	E	N	F	R	F	R	K	D	E	K	R	S	K	Y	Y	I	P	D	T	Q	T	E	V	F	A	F	H	P	K	L	V	G	S	S	T	K	Y	S	D	G	W	I	E	I	A	T	F	G	I	Y	S	P
Template Known Secondary structure									S	S																T	T	T										T	T			T	T	B		T	T	T													T		S	S	T	T	T												B
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
		278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	L	R	N	V	G	I	D	P	E	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T	M	L	R	Y	G	V	T	D	L	R	S	F	F	E	N	D	L
Query Conservation
Alig confidence											.	.	.
Template Conservation											.	.	.
Template Sequence		T	A	L	A	E	Y	D	I	P	.	.	.	Y	P	V	M	N	L	G	L	G	V	E	R	L	A	M	I	L	Y	G	Y	D	D	V	R	K	M	V	Y	P	Q	I
Template Known Secondary structure						T	T	T			.	.	.	S																		T		S								T	T	T
Template Predicted Secondary structure											.	.	.
Template SS confidence
		312	.	.	.	.	.	.	.	320				.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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