Job Description P08312 Confidence 98.85% Date Thu Jan 5 11:01:02 GMT 2012 Rank 57 Aligned Residues 186 % Identity 14% Template c2dq3A_ PDB info PDB header:ligase Chain: A: PDB Molecule:seryl-trna synthetase; PDBTitle: crystal structure of aq_298 Resolution 3.00 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.							.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.
Query Sequence		T	I	D	R	I	E	S	F	F	G	E	L	G	F	T	V	A	T	G	P	E	I	E	D	D	Y	H	N	F	D	A	L	N	I	P	G	H	H	P	A	R	A	D	H	D	T	F	W	F	D	T	T	R	L	L	R	T	Q	T	S	G	V	Q	I	R	T	M	K	A	Q	.	.	.	.	.	.	Q	P	P	I
Query Conservation																																																																								.	.	.	.	.	.
Alig confidence																											.	.	.	.	.																																									.	.	.	.	.	.
Template Conservation																											.	.	.	.	.
Template Sequence		L	I	N	F	X	L	D	L	H	T	K	K	G	Y	K	E	I	C	P	P	H	L	V	K	P	.	.	.	.	.	E	I	L	I	G	T	G	Q	L	P	K	F	E	E	D	L	Y	K	C	E	R	D	N	L	Y	L	I	P	T	A	E	V	P	L	T	N	L	Y	R	E	E	I	L	K	E	E	N	L	P	I
Template Known Secondary structure													T	T								S					.	.	.	.	.							S		T	T	T	T	G	G	G	S		B		T	T	T						S	S	T						G	G	G	T	T					T	T	T
Template Predicted Secondary structure																											.	.	.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.						.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.									.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.					.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.	.																		.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.	.																		.	.	.	.
Query Sequence		R	I	I	A	P	G	R	V	Y	R	N	D	Y	D	Q	T	.	.	.	.	.	.	.	.	H	T	P	M	F	H	Q	M	E	G	L	I	V	D	T	N	I	.	.	.	.	S	F	T	N	L	K	G	T	L	H	D	F	L	R	N	F	F	E	E	D	L	Q	I	R	F	R	P	S	Y	F	P	F	T	E	P
Query Conservation																		.	.	.	.	.	.	.	.																		.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.																		.	.	.	.																				.
Template Conservation																																																																		.
Template Sequence		Y	L	T	A	Y	T	P	C	Y	R	R	E	A	G	A	Y	G	K	D	I	R	G	I	I	R	Q	H	Q	F	D	K	V	E	L	V	K	I	V	H	P	D	T	S	Y	D	E	L	E	K	L	V	K	D	A	E	E	V	L	Q	L	L	G	L	P	.	Y	R	V	V	E	L	C	T	G	D	L	G	F	S	A
Template Known Secondary structure															S			S	S	S		S	S	S	S	S		S													G	G	G																				T			.								T	T	T			T	T
Template Predicted Secondary structure																																																																		.
Template SS confidence
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.
		254	.	.	.	.	.				260	.	.	.	.	.	.	.	.	.	270				.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.							.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure								.	.	.												.	.	.																			.	.	.	.	.	.
Query SS confidence								.	.	.												.	.	.																			.	.	.	.	.	.
Query Sequence		S	A	E	V	D	V	.	.	.	M	G	K	N	G	K	W	L	E	V	L	.	.	.	G	C	G	M	V	H	P	N	V	L	R	N	V	G	I	D	P	E	.	.	.	.	.	.	V	Y	S	G	F	A	F	G	M	G	M	E	R	L	T
Query Conservation								.	.	.												.	.	.																			.	.	.	.	.	.
Alig confidence								.	.	.												.	.	.																			.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	T	Y	D	I	E	V	W	F	P	S	Q	N	K	Y	R	E	I	S	S	C	S	N	C	E	D	F	Q	A	R	R	X	N	T	R	F	K	D	S	K	T	G	K	N	R	F	V	H	T	L	N	G	S	G	L	A	V	G	R	T	L
Template Known Secondary structure		S										G	G	G	T												T	T							T						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		332	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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